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Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10001865m |
Family | GH1 |
Protein Properties | Length: 501 Molecular Weight: 57581.8 Isoelectric Point: 6.6267 |
Chromosome | Chromosome/Scaffold: 23 Start: 1017274 End: 1020338 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 13 | 487 | 0 |
RASFPKGFLFGTATAAYQVEGAVNETCRGPALWDIYCKRYPERCNNDNGDVAVDFFHRYKEDIQLMKNLNTDAFRLSIAWPRIFPHGRREKGVSQAGVQF YHDLIDELLRNGIVPFVTVFHWDTPQDLEDQYGGFLSELIVNDFREYADYVFQEYGGKVKNWITFNEPWVFAHAGYDVGKKAPGRCSPYVNPKCQDGRSG YEAYLVSHNLLNSHAEAVEAFRKCEKCKGGKIGIAHSPAWFEPHDFDDAQDGASIDRALDFMMGWHLDTTTFGDYPQKMKDIVGHRLPKFTTEQKAKLKD STDFVGLNYYTSMFSNHLEKPDYSKPRWMQDSLISWETKNAQNYTIGSKPLTAALNVYSRGFRSLLKYIKDKYANPEIMIMENGYGEELGATDSIAVGTA DHNRKYYLQRHLLSMQEAICIDKVNVTGYFVWSLLDNFEWQDGYKNRFGLYYIDFNNNLTRYQKESGKYYKEFLS |
Full Sequence |
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Protein Sequence Length: 501 Download |
DGPVCPPSTK LSRASFPKGF LFGTATAAYQ VEGAVNETCR GPALWDIYCK RYPERCNNDN 60 GDVAVDFFHR YKEDIQLMKN LNTDAFRLSI AWPRIFPHGR REKGVSQAGV QFYHDLIDEL 120 LRNGIVPFVT VFHWDTPQDL EDQYGGFLSE LIVNDFREYA DYVFQEYGGK VKNWITFNEP 180 WVFAHAGYDV GKKAPGRCSP YVNPKCQDGR SGYEAYLVSH NLLNSHAEAV EAFRKCEKCK 240 GGKIGIAHSP AWFEPHDFDD AQDGASIDRA LDFMMGWHLD TTTFGDYPQK MKDIVGHRLP 300 KFTTEQKAKL KDSTDFVGLN YYTSMFSNHL EKPDYSKPRW MQDSLISWET KNAQNYTIGS 360 KPLTAALNVY SRGFRSLLKY IKDKYANPEI MIMENGYGEE LGATDSIAVG TADHNRKYYL 420 QRHLLSMQEA ICIDKVNVTG YFVWSLLDNF EWQDGYKNRF GLYYIDFNNN LTRYQKESGK 480 YYKEFLSEGI RPSTIKRDEL * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 7.0e-103 | 11 | 490 | 489 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-105 | 8 | 486 | 483 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-127 | 16 | 484 | 479 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-138 | 17 | 482 | 471 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-163 | 12 | 487 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB38783.1 | 0 | 1 | 500 | 25 | 525 | beta-glucosidase [Arabidopsis thaliana] |
DDBJ | BAH20034.1 | 0 | 1 | 500 | 25 | 524 | AT3G09260 [Arabidopsis thaliana] |
EMBL | CAA61592.1 | 0 | 1 | 500 | 25 | 524 | thioglucoside glucohydrolase [Arabidopsis thaliana] |
RefSeq | NP_176801.1 | 0 | 1 | 500 | 26 | 524 | BGLU21; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_187537.1 | 0 | 1 | 500 | 25 | 524 | PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 6 | 486 | 27 | 503 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3ptq_A | 0 | 6 | 486 | 27 | 503 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3ptm_B | 0 | 6 | 486 | 27 | 503 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3ptm_A | 0 | 6 | 486 | 27 | 503 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3ptk_B | 0 | 6 | 486 | 27 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG517145 | 306 | 33 | 338 | 0 |
CF652350 | 302 | 172 | 473 | 0 |
CF651724 | 302 | 96 | 397 | 0 |
CF652704 | 291 | 1 | 291 | 0 |
CF652244 | 299 | 196 | 494 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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