Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10001990m |
Family | GH5 |
Protein Properties | Length: 435 Molecular Weight: 49949.7 Isoelectric Point: 7.673 |
Chromosome | Chromosome/Scaffold: 12 Start: 10798806 End: 10801047 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 52 | 378 | 7.2e-33 |
DGKALYVNGWNSYWFMDHAVNDHSRHRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALDHVIAEAKTHGVRLLLSLVNNLQAYGGKT QYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNYLTVLLTRKNSITGIEYRNDPTIFAWELINEPRCLSDISGDTLQDWINEMTAFIKTIDKKHLLTVGLE GFYGPKSPKRLTVNPERWASELGSDFVRNSESPNIDFASVHIYPDHWFHDQGFEEKVKFVVKWMQSHIEDGDKELKKPVLFTEFGLSNLNKDYEPSQRDR FYRTIFDVVYKSAKRRRSGAGTLVWQL |
Full Sequence |
---|
Protein Sequence Length: 435 Download |
MAATGNGPLI PILGFLTCVA FIYLSFGDLW FDYKGEAELG FVRRNGTQFV VDGKALYVNG 60 WNSYWFMDHA VNDHSRHRVG AMLEAGAKMG LTVCRTWAFN DGGYNALQIS PGRFDERVFK 120 ALDHVIAEAK THGVRLLLSL VNNLQAYGGK TQYVNWAWQE GVGLSSSNDS FFFDPSIRRY 180 FKNYLTVLLT RKNSITGIEY RNDPTIFAWE LINEPRCLSD ISGDTLQDWI NEMTAFIKTI 240 DKKHLLTVGL EGFYGPKSPK RLTVNPERWA SELGSDFVRN SESPNIDFAS VHIYPDHWFH 300 DQGFEEKVKF VVKWMQSHIE DGDKELKKPV LFTEFGLSNL NKDYEPSQRD RFYRTIFDVV 360 YKSAKRRRSG AGTLVWQLLI QGMEGFNDDF GIVPWEQDSI QRLMMEQSCR LIRVTGRHHL 420 QDKKSRDMCS QHKP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 0.009 | 181 | 384 | 230 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 0.002 | 199 | 294 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 3.0e-5 | 202 | 348 | 149 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-22 | 81 | 393 | 322 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD20927.1 | 0 | 2 | 434 | 3 | 403 | (1-4)-beta-mannan endohydrolase [Arabidopsis thaliana] |
GenBank | ABK95966.1 | 0 | 3 | 433 | 5 | 435 | unknown [Populus trichocarpa] |
RefSeq | NP_179660.2 | 0 | 2 | 434 | 3 | 433 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | NP_194561.1 | 0 | 1 | 431 | 1 | 429 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330687.1 | 0 | 3 | 433 | 5 | 435 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 41 | 415 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 50 | 394 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 50 | 394 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 50 | 394 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 50 | 394 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |