Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10002515m |
Family | CBM43 |
Protein Properties | Length: 470 Molecular Weight: 50856.7 Isoelectric Point: 6.7805 |
Chromosome | Chromosome/Scaffold: 4 Start: 2361432 End: 2363547 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 381 | 464 | 9.2e-34 |
WCVANGDAGADRLQRGLDYACGEGGADCRPIQPGATCYSPDTLEAHASFAFNSYYQKKGRAGGSCYFGGAAYVVSQPPKYGRCE | |||
GH17 | 25 | 344 | 0 |
IGVNYGRISDELPSAVKVVQLLKSQGIDRVKIFDADPAVLKALSGSGIRVTVDLPNEILFSAAKRASFAASWVKRNVAAYHPSTQIESIAVGNEVFVDPH NTTKFLIPAMRNIHKALISFNLHSSIKISSPLALSALQNSYPSSSGSFRPELVDLVIKPMLDFLRETGSRLMINVYPFFAYEGNSDVIPLDYALLRENPG MVDSGNGLRYFNLFDAQIDAVFAAMSALKYDDIEIIVTETGWPSKGDENEVGATVANAASYNGNLIRRILTGGGTPLRPKADLTVYLFALFNENKKFGPT SERNYGLFFPDEKKVYDVPF |
Full Sequence |
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Protein Sequence Length: 470 Download |
MDFFLTSFIF LLLLSPISLS DAGSIGVNYG RISDELPSAV KVVQLLKSQG IDRVKIFDAD 60 PAVLKALSGS GIRVTVDLPN EILFSAAKRA SFAASWVKRN VAAYHPSTQI ESIAVGNEVF 120 VDPHNTTKFL IPAMRNIHKA LISFNLHSSI KISSPLALSA LQNSYPSSSG SFRPELVDLV 180 IKPMLDFLRE TGSRLMINVY PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA 240 QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATVA NAASYNGNLI RRILTGGGTP 300 LRPKADLTVY LFALFNENKK FGPTSERNYG LFFPDEKKVY DVPFTQEGLK HFRNTPVAGD 360 QRVSPPINGG GVSKSLTGSS WCVANGDAGA DRLQRGLDYA CGEGGADCRP IQPGATCYSP 420 DTLEAHASFA FNSYYQKKGR AGGSCYFGGA AYVVSQPPKY GRCEFPTGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 201 | 320 | 128 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-26 | 380 | 452 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-42 | 380 | 465 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-101 | 25 | 344 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD26909.1 | 0 | 21 | 458 | 21 | 461 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | NP_178637.2 | 0 | 21 | 469 | 21 | 472 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302861.1 | 0 | 3 | 469 | 4 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 17 | 469 | 16 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 20 | 458 | 19 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 25 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 25 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 25 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 25 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |