| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10002525m |
| Family | GT19 |
| Protein Properties | Length: 455 Molecular Weight: 50925.4 Isoelectric Point: 9.2249 |
| Chromosome | Chromosome/Scaffold: 4 Start: 4079033 End: 4081376 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 41 | 418 | 0 |
| VFIVSGEVSGDNIGSRLMASLKNLSPFPLRFHGVGGSLMCKQGMTSLFPMEDLAVMGLWELLPHLYKFRVKLKETIDAAVKFKPHVVVTVDSKGFSFRLL KELRARYNQKRLENSPLHFHYVAPSFWAWRGGESRLGGLSEFVDHLFCILPNEEKICREHGVEATFVGHPILEDASEFNLARTWKLQESNLEGLSFSKYS LPSDSMVISVLPGSRLQEVERMLPIFSKAMKLLKEPFPRLVTLIHVASNSQVDHYIGESLRDWPVPAILVPSGSTQLKYDAFNASQAALCTSGTVAIELQ LARLPSLVSYRAHFLTELVIRYKAKIPYISLPNILLDSPIIPEALFQACNPSNLASILERLLLDEKMREKQVVAAEKL | |||
| Full Sequence |
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| Protein Sequence Length: 455 Download |
| MFRISKIQLS FSLATFTKRF SSFQATKLVI DKAAIDGELR VFIVSGEVSG DNIGSRLMAS 60 LKNLSPFPLR FHGVGGSLMC KQGMTSLFPM EDLAVMGLWE LLPHLYKFRV KLKETIDAAV 120 KFKPHVVVTV DSKGFSFRLL KELRARYNQK RLENSPLHFH YVAPSFWAWR GGESRLGGLS 180 EFVDHLFCIL PNEEKICREH GVEATFVGHP ILEDASEFNL ARTWKLQESN LEGLSFSKYS 240 LPSDSMVISV LPGSRLQEVE RMLPIFSKAM KLLKEPFPRL VTLIHVASNS QVDHYIGESL 300 RDWPVPAILV PSGSTQLKYD AFNASQAALC TSGTVAIELQ LARLPSLVSY RAHFLTELVI 360 RYKAKIPYIS LPNILLDSPI IPEALFQACN PSNLASILER LLLDEKMREK QVVAAEKLTL 420 LLHPSERGMS SDLESQRYTP SILAASTILS YVKP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 6.0e-47 | 42 | 418 | 386 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 7.0e-50 | 41 | 411 | 374 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 9.0e-75 | 41 | 429 | 390 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 3.0e-100 | 39 | 411 | 376 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 2.0e-104 | 39 | 421 | 385 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 33 | 454 | 2 | 431 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 29 | 449 | 34 | 463 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 1 | 453 | 2 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 29 | 449 | 9 | 439 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 18 | 454 | 26 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FY429474 | 268 | 1 | 267 | 0 |
| DK475923 | 217 | 1 | 216 | 0 |
| EV196281 | 236 | 1 | 235 | 0 |
| DK458146 | 224 | 1 | 217 | 0 |
| DK547548 | 207 | 253 | 453 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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