Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10002822m |
Family | CBM43 |
Protein Properties | Length: 546 Molecular Weight: 60774.2 Isoelectric Point: 4.8875 |
Chromosome | Chromosome/Scaffold: 4 Start: 7158853 End: 7160490 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 427 | 507 | 8.3e-25 |
WCVLDPNAFNLDDLADNVDYACSLSDCTSLGYGSSCNHLTNIGNASYAFNMYYQMHDQNTWECDFLGLGLITDEDPSDELC | |||
GH17 | 84 | 404 | 0 |
VGVNWGTMASHQLPPQNVVKMLKDNGFTKLKLFEADQNILDALIGSEIEVMIGIPNRLLKEVAQDPDVAASWVEENVTAYYYHGGVNIKYIAVGNEPFLQ TYNGTYVEFTLPALVNIQRALEEADLKTVKVTVPFNADIYFSPESNPVPSAGDFRPELRDATIEIINFLYTHDSPFTVNIYPFLSLYGNAYFPLDFAFFD GTNKPLRDGDLVYTNVFDANLDTLVCAMERYSFLGMKIIVGEVGWPTDGDKNANSKSAKRFNQGMVKHAMSGNGTPARKGVIMDVYLFSLVDEDAKSIAP GTFERHWGIFGFDGRPKYELD |
Full Sequence |
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Protein Sequence Length: 546 Download |
MALSHAVSAS LTEPRTKSQI QSPFIFVLML KPLKPQNGKR KDSTKNKQEK KKMAESRNNF 60 FPHQILCLFL VSQVSIVSSN SSSVGVNWGT MASHQLPPQN VVKMLKDNGF TKLKLFEADQ 120 NILDALIGSE IEVMIGIPNR LLKEVAQDPD VAASWVEENV TAYYYHGGVN IKYIAVGNEP 180 FLQTYNGTYV EFTLPALVNI QRALEEADLK TVKVTVPFNA DIYFSPESNP VPSAGDFRPE 240 LRDATIEIIN FLYTHDSPFT VNIYPFLSLY GNAYFPLDFA FFDGTNKPLR DGDLVYTNVF 300 DANLDTLVCA MERYSFLGMK IIVGEVGWPT DGDKNANSKS AKRFNQGMVK HAMSGNGTPA 360 RKGVIMDVYL FSLVDEDAKS IAPGTFERHW GIFGFDGRPK YELDLSGQGK DYPLVPVEDV 420 KYLPKTWCVL DPNAFNLDDL ADNVDYACSL SDCTSLGYGS SCNHLTNIGN ASYAFNMYYQ 480 MHDQNTWECD FLGLGLITDE DPSDELCEFP VMIDTGNSPR LQHKSLRMLT RVAATVLVVL 540 VLSLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 293 | 396 | 117 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-17 | 426 | 495 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 426 | 509 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-73 | 87 | 404 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28113.1 | 0 | 6 | 541 | 460 | 973 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189076.1 | 0 | 49 | 545 | 4 | 500 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002281500.1 | 0 | 53 | 542 | 1 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324967.1 | 0 | 81 | 518 | 6 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515573.1 | 0 | 67 | 542 | 10 | 488 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 84 | 406 | 3 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3ur8_A | 0 | 84 | 406 | 3 | 315 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3ur7_B | 0 | 84 | 406 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 84 | 406 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 84 | 406 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797198 | 431 | 87 | 515 | 0 |
EX345626 | 313 | 163 | 474 | 0 |
EX343142 | 311 | 200 | 509 | 0 |
EX341879 | 297 | 183 | 478 | 0 |
EX345865 | 296 | 163 | 457 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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