y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10002927m |
Family | CE8 |
Protein Properties | Length: 333 Molecular Weight: 37257.6 Isoelectric Point: 9.7142 |
Chromosome | Chromosome/Scaffold: 4 Start: 7523980 End: 7525688 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 31 | 320 | 0 |
VFVDQSGNGNFTKIQKAIDSVPTNNRHWFFINVAAGIYWEKLKIPYDKRFIVIIGAGKRKTRVEWDDHYSVEQSPTFASEANNTVVKSLTFVNTYNFPRN GKVNKNPRTPAVTAMISGDMSAFYSVGFAGVQDTLWDLKGRHYFHRCTIQGAVDFIFGNGQSIYKKCVIQVLGALLQPGTAGYITAQGRTNPYDANGFVF IDSLVHGTGKAFLGRPWRGYARVIFYNTNLTNVIVPEGWDAWKYVGREYQLTFAEYGCFGSGSNTQKRVGWVKKLSGSVVQSLTDLNFIN |
Full Sequence |
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Protein Sequence Length: 333 Download |
MGTHRLFIVL VAFCCSCLIE AKPYGVYHQQ VFVDQSGNGN FTKIQKAIDS VPTNNRHWFF 60 INVAAGIYWE KLKIPYDKRF IVIIGAGKRK TRVEWDDHYS VEQSPTFASE ANNTVVKSLT 120 FVNTYNFPRN GKVNKNPRTP AVTAMISGDM SAFYSVGFAG VQDTLWDLKG RHYFHRCTIQ 180 GAVDFIFGNG QSIYKKCVIQ VLGALLQPGT AGYITAQGRT NPYDANGFVF IDSLVHGTGK 240 AFLGRPWRGY ARVIFYNTNL TNVIVPEGWD AWKYVGREYQ LTFAEYGCFG SGSNTQKRVG 300 WVKKLSGSVV QSLTDLNFIN IGGWLQYLPI PV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 6.0e-76 | 36 | 326 | 301 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 2.0e-76 | 33 | 325 | 294 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 9.0e-80 | 33 | 326 | 294 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 3.0e-99 | 31 | 330 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 0 | 1 | 330 | 333 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01354.1 | 0 | 1 | 331 | 1 | 330 | pectin methylesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_189055.1 | 0 | 1 | 331 | 1 | 334 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_197400.1 | 0 | 1 | 332 | 1 | 330 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002323773.1 | 0 | 31 | 330 | 1 | 289 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 31 | 330 | 48 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-39 | 31 | 331 | 9 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-27 | 33 | 301 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-18 | 6 | 280 | 13 | 312 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-17 | 26 | 329 | 3 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-17 | 26 | 329 | 3 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |