y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10003213m |
Family | GH17 |
Protein Properties | Length: 434 Molecular Weight: 46339.1 Isoelectric Point: 6.627 |
Chromosome | Chromosome/Scaffold: 17 Start: 4077826 End: 4081418 |
Description | Glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 344 | 0 |
IGVNYGQVADNLPPPSATAKLLQSTTIQKVRLYGSDPATIKALANTGIEIVIGTNDVPGLASDPNLAGSWVETNVVPYYPASKIILIAVGNEVTTFGDRN LMSQLLPAMRNVQSALEAASLGGGKIKVSTVHVMSVLGQSDPPSAGVFAPDHADILKGLLEFNRETGSPFAVNPYPFFAYQSDPRPDTLAYCLFEPNPGR VDSNSKIKYMNMFDAQVDAVYSALSKMGFKDVEIVVAETGWPYKGDPTEAGATIENARAYNKNLIGHLKSMAGTPLMPGKVIDTYLFALYDENLKPGKGS ERAFGLFKPDLTMTYDI |
Full Sequence |
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Protein Sequence Length: 434 Download |
MAASLYTLIL LFFSCLHALH QAKSQPFIGV NYGQVADNLP PPSATAKLLQ STTIQKVRLY 60 GSDPATIKAL ANTGIEIVIG TNDVPGLASD PNLAGSWVET NVVPYYPASK IILIAVGNEV 120 TTFGDRNLMS QLLPAMRNVQ SALEAASLGG GKIKVSTVHV MSVLGQSDPP SAGVFAPDHA 180 DILKGLLEFN RETGSPFAVN PYPFFAYQSD PRPDTLAYCL FEPNPGRVDS NSKIKYMNMF 240 DAQVDAVYSA LSKMGFKDVE IVVAETGWPY KGDPTEAGAT IENARAYNKN LIGHLKSMAG 300 TPLMPGKVID TYLFALYDEN LKPGKGSERA FGLFKPDLTM TYDIGLTKTA NQTSMAPQSP 360 TPRFPPSAAP TSQTLLAPPQ TILPSPTSPS DKNSGQTDVH NSTPRTASVA HLCCSLSIST 420 MMLFVSILYA LII* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-10 | 27 | 337 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-103 | 28 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10628.1 | 0 | 1 | 331 | 1 | 331 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_199086.2 | 0 | 1 | 415 | 1 | 418 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282736.1 | 0 | 9 | 383 | 9 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329975.1 | 0 | 6 | 359 | 6 | 360 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510373.1 | 0 | 7 | 365 | 8 | 366 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 25 | 347 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 25 | 347 | 1 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |