| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10003782m |
| Family | GT5 |
| Protein Properties | Length: 658 Molecular Weight: 72645.9 Isoelectric Point: 6.2107 |
| Chromosome | Chromosome/Scaffold: 6 Start: 3152913 End: 3157163 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 148 | 647 | 0 |
| NIVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVVSPRYQNGTPADNNYARAKDLGVRVTVHCFGASQEVSFYHEYRDGVDWVFVDHQSYHRPGNP YGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYSNLGLPSEWYG AVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWDPSKDEHIPFHYTVDDFSEKVKC KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRF EPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYADGGAGAGTGWVFSPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMSRNYSWQNAAVQYEQVFQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 658 Download |
| MSSLQISSGS VRFEPVVGFN RTGHFRPIGS LGFPRFRRRF SIARPLLLRR SSFSGDKISG 60 SGESESDDKG FITDAERDGS GSVLGFQLTP PPGEENFNTS TEEATHQEDK KEAIDETKMA 120 DFGVPGNRAV EERGAAEISI NKAEVVNNIV FVTSEAAPYS KTGGLGDVCG SLPIALAGRG 180 HRVMVVSPRY QNGTPADNNY ARAKDLGVRV TVHCFGASQE VSFYHEYRDG VDWVFVDHQS 240 YHRPGNPYGD SKGAFGDNQF RFTLLCHAAC EAPLVLPLGG FTYGEKSLFL VNDWHAGLVP 300 ILLAAKYRPY GVYKDARSIL IIHNLAHQGV EPAATYSNLG LPSEWYGAVG WVFPTWARTH 360 ALDTGEAVNV LKGAIVTSDR IITVSQGYAW EITTVEGGYG LQDLLSSRKS VINGITNGIN 420 VDEWDPSKDE HIPFHYTVDD FSEKVKCKMA LQKELGLPIR PECPMIGFIG RLDYQKGIDL 480 IQTAGPDLMV DDIQFVMLGS GDPKYESWMR SMEETYRDKF RGWVGFNVPI SHRITAGCDI 540 LLMPSRFEPC GLNQLYAMRY GTIPVVHGTG GLRDTVENFN PYADGGAGAG TGWVFSPLSK 600 DSMVSALRLA AATYREYKQS WEGLMRRGMS RNYSWQNAAV QYEQVFQWVF MDPPYVK* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-103 | 152 | 647 | 506 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 5.0e-144 | 148 | 649 | 509 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-173 | 148 | 647 | 514 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 148 | 648 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 148 | 647 | 501 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF24126.1 | 0 | 94 | 656 | 11 | 574 | AF121673_1 soluble starch synthase [Arabidopsis thaliana] |
| GenBank | ABV25893.1 | 0 | 1 | 656 | 1 | 632 | starch synthase isoform I [Manihot esculenta] |
| RefSeq | NP_197818.1 | 0 | 1 | 656 | 1 | 651 | SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1); starch synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002277372.1 | 0 | 26 | 656 | 21 | 632 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321996.1 | 0 | 25 | 657 | 28 | 649 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 148 | 646 | 11 | 508 | A Chain A, Peanut Peroxidase |
| PDB | 3vue_A | 0 | 148 | 646 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 148 | 646 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 148 | 646 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 148 | 646 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO595058 | 492 | 164 | 655 | 0 |
| HO581986 | 368 | 257 | 623 | 0 |
| GO872237 | 347 | 308 | 654 | 0 |
| EX370286 | 315 | 306 | 620 | 0 |
| HO581986 | 34 | 622 | 655 | 0.00002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
