| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10003853m |
| Family | CE8 |
| Protein Properties | Length: 606 Molecular Weight: 65553.8 Isoelectric Point: 6.6213 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1185224 End: 1187727 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 290 | 596 | 0 |
| VTVCKDGGKGPCGYKTVQEAVDAAPGTNGTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTYNSATVGVLGDGFMARDLTI ENTAGADAHQAVAFRSDSDFSILENCEFLGNQDTVYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCSILIASKNSKLEQGGGANNAITAHGRIDASQST GFVFLNCSINGTEEYMKEFQANPKAHTNYLGRPWKEFSRTVFVNCNLESLISPEGWMPWDGDFALKTLYYGEYKNTGPGSVRSKRVPWSSEIPEKHVDVY SVANFIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 606 Download |
| MDSPKLPYSL SASSSTPFAS SAVKPHRKNL PSRNCILIII ATSSILLLLL TLILYATTSK 60 SSHHRHNTPQ QTPSSGDTPP PETPSPPPIA QIRLACNATR FPDHCFSSLS KPGRVPPDPK 120 PVQIIHSAIS VSFESLKSGQ TKIKSILDSS AGNKNRTNIA TICLQILSYA EHRTESTDVA 180 VTSGDIKDAR AWMSAALAYQ YDCWSGLKTV NDTKQVVDTI TFLDDLVKLT GNALSMMVSF 240 DSFGDDVASW IHPATERDGF WEKAGPSLGS GMGTAKEADL GFPSGLTEDV TVCKDGGKGP 300 CGYKTVQEAV DAAPGTNGTV KFVIRIREGV YEETVRVPFE KKNVVFIGDG MGKTVITGSL 360 NVGQPGMTTY NSATVGVLGD GFMARDLTIE NTAGADAHQA VAFRSDSDFS ILENCEFLGN 420 QDTVYAHSLR QFYKQCRIQG NVDFIFGNSA AVFQDCSILI ASKNSKLEQG GGANNAITAH 480 GRIDASQSTG FVFLNCSING TEEYMKEFQA NPKAHTNYLG RPWKEFSRTV FVNCNLESLI 540 SPEGWMPWDG DFALKTLYYG EYKNTGPGSV RSKRVPWSSE IPEKHVDVYS VANFIQAHEW 600 ASTTA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 3.0e-102 | 90 | 604 | 550 | + pectinesterase | ||
| PLN02713 | PLN02713 | 4.0e-105 | 95 | 605 | 557 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-109 | 122 | 604 | 496 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-154 | 289 | 597 | 312 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 61 | 605 | 545 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM91523.1 | 0 | 193 | 605 | 1 | 409 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB09534.1 | 0 | 76 | 605 | 56 | 577 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196538.1 | 0 | 76 | 605 | 30 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_568991.2 | 0 | 1 | 605 | 1 | 602 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 43 | 605 | 2 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 289 | 577 | 8 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 299 | 604 | 11 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-19 | 287 | 573 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-19 | 287 | 573 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-19 | 287 | 573 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
