Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10003952m |
Family | AA1 |
Protein Properties | Length: 545 Molecular Weight: 60615 Isoelectric Point: 9.8244 |
Chromosome | Chromosome/Scaffold: 6 Start: 359601 End: 362495 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 53 | 502 | 0 |
QQVILINGQFPGPKLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVMGTNCPIPPNSNFTYKFQTKDQIGTYNYFPSTAFHKAAGGFGAINVY ARPGIPIPYPLPVADFTLLIGDWFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQSTFTGDQGKAYMFRISNVGSSSSFNFRIQGHTMKVVEVEGSHVIQN DYDSLDVHVGQSLSVLVTLNQSPKDYYIVASTRFVRSKLSVTGLLRYSNSRVPASGDLPALPPGELVWSMRQARTFKWNLTANAARPNPQGSFHYGKIIT TKSFVFSNSAPLINGKQRYAVNGVSYVNSETPLKLADHFKIEGVFSTNSIQSVPSNSPATVATSVVQASLHDFLEIVFQNNEKSMQSWHLDGYDFWVVGF GSGQWTPSKRPLYNLADALTRHTTQVYPNSWTAILVSLDNQGMWNMRSAI |
Full Sequence |
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Protein Sequence Length: 545 Download |
MKMARVRTTS SLFHLLGALA LLSSLVIVKG ESPYKFYTWT VTYGIISPLG VPQQVILING 60 QFPGPKLDVV TNDNIILNLI NKLDQPFLLT WNGIKQRKNS WQDGVMGTNC PIPPNSNFTY 120 KFQTKDQIGT YNYFPSTAFH KAAGGFGAIN VYARPGIPIP YPLPVADFTL LIGDWFKTNH 180 KTLQQRLDSG GVLPFPDGML INGQTQSTFT GDQGKAYMFR ISNVGSSSSF NFRIQGHTMK 240 VVEVEGSHVI QNDYDSLDVH VGQSLSVLVT LNQSPKDYYI VASTRFVRSK LSVTGLLRYS 300 NSRVPASGDL PALPPGELVW SMRQARTFKW NLTANAARPN PQGSFHYGKI ITTKSFVFSN 360 SAPLINGKQR YAVNGVSYVN SETPLKLADH FKIEGVFSTN SIQSVPSNSP ATVATSVVQA 420 SLHDFLEIVF QNNEKSMQSW HLDGYDFWVV GFGSGQWTPS KRPLYNLADA LTRHTTQVYP 480 NSWTAILVSL DNQGMWNMRS AIWERQYSGQ QFYLKVWDPV QSLANEYNPP DNLLLCGKAI 540 GRHQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 26 | 543 | 518 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 26 | 541 | 526 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 27 | 543 | 518 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 28 | 543 | 521 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 32 | 538 | 520 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61328.1 | 0 | 1 | 543 | 1 | 545 | pectinesterase-like protein [Arabidopsis thaliana] |
DDBJ | BAB08634.1 | 0 | 26 | 543 | 26 | 543 | pectinesterase like protein [Arabidopsis thaliana] |
EMBL | CBI18560.1 | 0 | 15 | 543 | 6 | 534 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_569041.1 | 0 | 1 | 543 | 1 | 545 | sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002270831.1 | 0 | 15 | 543 | 7 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 35 | 509 | 4 | 516 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 35 | 509 | 4 | 516 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 35 | 509 | 4 | 516 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 35 | 509 | 4 | 516 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 35 | 509 | 4 | 516 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |