y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004092m |
Family | CBM43 |
Protein Properties | Length: 486 Molecular Weight: 53894.9 Isoelectric Point: 6.1908 |
Chromosome | Chromosome/Scaffold: 6 Start: 1122732 End: 1124804 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 449 | 4.1e-25 |
WCVVNKDTINLEEVGPDLDYACYHGDCTAMEGGSTCSKLDKIQNISYAFNMYFQIQGQDVRACDFKGAAMITKNNASVGSC | |||
GH17 | 29 | 347 | 0 |
GVNWGNIASHPLNPDIVVRMLKDNKINKVKLFDADSWTMNALAGTGMEVMVGIPNNLLETLAEDYDNAKDWVKENITAYMRKDGVNIKYVAVGNEPFLSA YNGSFLKTTFPALKNIHRALKEAGHTDKMKATIPQNAEVYQSANDKPSEGDFRSDVKQTMLDIVKFFKDNDLPFTVNIYPFLSLYLNQHFPFEFAFLDGD GQTIPDNGKNYDNVFDANYDTLVYALRKAGIKDMKIIVGEVGWPTDGHKYATPKLAEKFYAGLMKRLAKDGGTPLRPERLEVYLFGLLDEDMKSILPGPF ERHWGIFRYDGTPKFMLDF |
Full Sequence |
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Protein Sequence Length: 486 Download |
MAGRAAMLVN VGTVVMTVLT LASLVGGFGV NWGNIASHPL NPDIVVRMLK DNKINKVKLF 60 DADSWTMNAL AGTGMEVMVG IPNNLLETLA EDYDNAKDWV KENITAYMRK DGVNIKYVAV 120 GNEPFLSAYN GSFLKTTFPA LKNIHRALKE AGHTDKMKAT IPQNAEVYQS ANDKPSEGDF 180 RSDVKQTMLD IVKFFKDNDL PFTVNIYPFL SLYLNQHFPF EFAFLDGDGQ TIPDNGKNYD 240 NVFDANYDTL VYALRKAGIK DMKIIVGEVG WPTDGHKYAT PKLAEKFYAG LMKRLAKDGG 300 TPLRPERLEV YLFGLLDEDM KSILPGPFER HWGIFRYDGT PKFMLDFTGQ GRKIVPVGAK 360 GVQYMDKQWC VVNKDTINLE EVGPDLDYAC YHGDCTAMEG GSTCSKLDKI QNISYAFNMY 420 FQIQGQDVRA CDFKGAAMIT KNNASVGSCL FPVQIVSASD DFRISFVFGR FIVVGLVLLG 480 LVTAI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-5 | 264 | 338 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-19 | 368 | 438 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-32 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-67 | 29 | 347 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 28 | 460 | 27 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 1 | 465 | 1 | 465 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 28 | 460 | 27 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 15 | 478 | 20 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 14 | 460 | 15 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 348 | 4 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ur8_A | 0 | 29 | 348 | 4 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ur7_B | 0 | 29 | 348 | 4 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 348 | 4 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 348 | 4 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |