CAZyme Information

Basic Information
SpeciesThellungiella halophila
Cazyme IDThhalv10004148m
FamilyGH43
Protein PropertiesLength: 469 Molecular Weight: 53515 Isoelectric Point: 7.9819
ChromosomeChromosome/Scaffold: 6 Start: 590002 End: 591786
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431623913e-35
  ILHDEKSNTYYWYGEYKDGPTYHAHKKGPARVDVIGVGCYSSKDLWTWNNEGIVLGAEETNKTHDLHKSNVLERPKVIYNEKTEKYVMWMHIDDANYTKA
  SVGVAVSDNPTGPFEYLYSKRPHGFDSRDMTVFKDDDGVAYLIYSSEVNSVLHIGPLTEDYLDVTPVMRKVMVGQHREAPAIFKHDNTYYMITSWCTGWA
  PNEALAHAAESIMGPWEKLGNPCIGGNKVF
Full Sequence
Protein Sequence     Length: 469     Download
MKNSKHNKKP TSWHCNDAGG CRYSLLTIVW TVVGFFLVAH LISLYSRKDN IDQELPSNQL    60
QVRHHHIHHP VVHELVRVEE EILRMPPPRK RSPRTCKRKS RKPIPLVEEF LDEKSPIRHL    120
FFPATSFGPT KGMGNDTLLH YLPGKIWMDT EGNPIQAHGG GILHDEKSNT YYWYGEYKDG    180
PTYHAHKKGP ARVDVIGVGC YSSKDLWTWN NEGIVLGAEE TNKTHDLHKS NVLERPKVIY    240
NEKTEKYVMW MHIDDANYTK ASVGVAVSDN PTGPFEYLYS KRPHGFDSRD MTVFKDDDGV    300
AYLIYSSEVN SVLHIGPLTE DYLDVTPVMR KVMVGQHREA PAIFKHDNTY YMITSWCTGW    360
APNEALAHAA ESIMGPWEKL GNPCIGGNKV FRLTTFFAQS TYVIPVPGVT GAFIFMADRW    420
NPADLRDSRY VWLPLVIGGP ADQPLESNFG FPMWSRVSIY WHSKWHLP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_21.0e-16236383166+
cd09004GH43_bXyl6.0e-21199382194+
cd08990GH43_AXH_like4.0e-22164378229+
cd08978GH_F3.0e-55169437280+
cd08985GH43_63.0e-133155437284+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI33680.106846825427unnamed protein product [Vitis vinifera]
RefSeqNP_190557.1014684458glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.201846814466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_975008.101146812471glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.10146832492beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F014243543328A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB3vt2_E014243543328A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB3vt2_D014243543328A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB3vt2_C014243543328A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
PDB3vt2_B014243543328A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron
Transmembrane Domains
StartEnd
2042
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8561533291394670
GO3743623451294680
EY7037302951524460
GO8017532941754680
GT7395993011404400
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny