Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004182m |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 50471.7 Isoelectric Point: 7.063 |
Chromosome | Chromosome/Scaffold: 6 Start: 3167703 End: 3169556 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 379 | 456 | 2e-25 |
WCVTKSGAETVALQRNIDYVCGLGLDCRPIIKGGACFFPNTVEAHSAYAMNLFYQTMGKHEFDCDFDKTGDITAINPS | |||
GH17 | 37 | 351 | 0 |
IGVNYGTLANNLPPPRQVAEFLLHSTVINRIRLFDADPQILRAFAHTGIAVTVTVPNHQITHLTNLSFAEQWISDHIQPHFPSTNIIRILVGNEVISTAN HLLIRTLVPAMQSLHTALVSASLHRRIQISTPHSLGILSDSTPPSSAKFRQGYDTHVLKPLLSFLRSIASPFVVNPYPFFGYSPDTLDFALFRPNQGLLD HDSKLLYTNMFDAQLDSVYSAMDRLGFSDVEIVVGEIGWPSEGDGGQIGVDVATAAEFNKKVVARVNSGIGTPLMPNRTFETYIFALFNENLKSGPTSER NFGLFRSDLTPIYDI |
Full Sequence |
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Protein Sequence Length: 459 Download |
MNYMLLFFSC SWVISPISMF TMVVALIIFS TGANASIGVN YGTLANNLPP PRQVAEFLLH 60 STVINRIRLF DADPQILRAF AHTGIAVTVT VPNHQITHLT NLSFAEQWIS DHIQPHFPST 120 NIIRILVGNE VISTANHLLI RTLVPAMQSL HTALVSASLH RRIQISTPHS LGILSDSTPP 180 SSAKFRQGYD THVLKPLLSF LRSIASPFVV NPYPFFGYSP DTLDFALFRP NQGLLDHDSK 240 LLYTNMFDAQ LDSVYSAMDR LGFSDVEIVV GEIGWPSEGD GGQIGVDVAT AAEFNKKVVA 300 RVNSGIGTPL MPNRTFETYI FALFNENLKS GPTSERNFGL FRSDLTPIYD IGILRPTVRT 360 SNPENNPRSP GRGSSGKRWC VTKSGAETVA LQRNIDYVCG LGLDCRPIIK GGACFFPNTV 420 EAHSAYAMNL FYQTMGKHEF DCDFDKTGDI TAINPSIH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-16 | 378 | 448 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-30 | 379 | 456 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-92 | 37 | 351 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 22 | 456 | 9 | 452 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001031936.1 | 0 | 31 | 456 | 24 | 449 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_001119271.1 | 0 | 31 | 458 | 24 | 451 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002271991.1 | 0 | 22 | 456 | 9 | 473 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526252.1 | 0 | 21 | 457 | 11 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 37 | 351 | 3 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ur8_A | 0 | 37 | 351 | 3 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ur7_B | 0 | 37 | 351 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 37 | 351 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2cyg_A | 0 | 37 | 351 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |