Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004223m |
Family | AA1 |
Protein Properties | Length: 445 Molecular Weight: 49428.1 Isoelectric Point: 10.0436 |
Chromosome | Chromosome/Scaffold: 6 Start: 11827407 End: 11829536 |
Description | SKU5-similar 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 4 | 399 | 0 |
TTCPIPPRANYTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPGIPVPFADPAGDYTVLIGDWYKSNHTDLKSRLDKGKKLPSPDGILINGRSNG ATLNVEQGKTYRLRISNVGLQNSLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSYSVLITADQSPRDYYLVVSSRFTDKTITTMGVLRYSGSSTSA SGSVPGGPTIQIDWSLNQARAIRTNLTASGPRPNPQGSYHYGLIPLIRTIVFGSSAGQINGKQRYGINSVSFVPADTPLKLADFFKISGVYKINSISDKP TGGGLYLDTSVLQVDYRTFIEIIFENKEDIVQSYHLNGYSFWVVGMDGGQWNTGSRNGYNLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNIRSEF |
Full Sequence |
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Protein Sequence Length: 445 Download |
MYGTTCPIPP RANYTYILQV KDQIGSFYYF PSLAFHKAAG GFGGIRILSR PGIPVPFADP 60 AGDYTVLIGD WYKSNHTDLK SRLDKGKKLP SPDGILINGR SNGATLNVEQ GKTYRLRISN 120 VGLQNSLNFR IQNHRMKLVE VEGTHTLQTM FSSLDVHVGQ SYSVLITADQ SPRDYYLVVS 180 SRFTDKTITT MGVLRYSGSS TSASGSVPGG PTIQIDWSLN QARAIRTNLT ASGPRPNPQG 240 SYHYGLIPLI RTIVFGSSAG QINGKQRYGI NSVSFVPADT PLKLADFFKI SGVYKINSIS 300 DKPTGGGLYL DTSVLQVDYR TFIEIIFENK EDIVQSYHLN GYSFWVVGMD GGQWNTGSRN 360 GYNLRDAVSR STVQVYPKSW TAIYIALDNV GMWNIRSEFW ARQYLGQQLY LRVFTTSTSL 420 RDEYPIPKNS RLCGRAKGRH TRPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 2.0e-164 | 3 | 435 | 445 | + copper ion binding / pectinesterase | ||
PLN02991 | PLN02991 | 0 | 1 | 441 | 441 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 1 | 441 | 445 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 3 | 441 | 439 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 438 | 447 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF99833.1 | 0 | 1 | 444 | 98 | 541 | AC008046_5 Putative pectinesterase [Arabidopsis thaliana] |
GenBank | AAL24296.1 | 0 | 1 | 444 | 99 | 542 | Unknown protein [Arabidopsis thaliana] |
DDBJ | BAH20248.1 | 0 | 28 | 444 | 1 | 417 | AT1G41830 [Arabidopsis thaliana] |
RefSeq | NP_177743.1 | 0 | 1 | 444 | 98 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_564479.1 | 0 | 1 | 444 | 99 | 542 | SKS6 (SKU5-SIMILAR 6); pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 5e-36 | 4 | 434 | 79 | 539 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asq_A | 5e-36 | 4 | 434 | 79 | 539 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asp_B | 5e-36 | 4 | 434 | 79 | 539 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asp_A | 5e-36 | 4 | 434 | 79 | 539 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aso_B | 5e-36 | 4 | 434 | 79 | 539 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO801725 | 439 | 4 | 440 | 0 |
JG072509 | 327 | 13 | 338 | 0 |
JK988093 | 300 | 114 | 413 | 0 |
DN795140 | 292 | 14 | 305 | 0 |
CK117520 | 256 | 186 | 441 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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