Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10004263m |
Family | GH5 |
Protein Properties | Length: 432 Molecular Weight: 48800.2 Isoelectric Point: 9.8013 |
Chromosome | Chromosome/Scaffold: 6 Start: 171979 End: 174151 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 42 | 364 | 1.2e-34 |
NGYPYYANGFNAYWLMYVASDPSQRSKISAAFQEASRHGLTVARTWAFSDGGYRPLQYTPGSYNEDMFQGLDFAIAEARRHGIKVILSFANNYVSFGGKK QYVDWARSRGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDTTIMAWELMNEPRCPSDPTGRTIQAWVTEMAAHVKSLDRNHLLEAGLEG FYGQSSPQSKTLNPPGQFGTDFIANNRVPGIDFVTVHSYPDEWFVDSSEQAQMEFLNKWIDAHIQDAQNVLQKPIIIAEFGKSEKKAGYSPAQRDIVYNT VYSKIYGSAKRGGAAAGGLFWQL |
Full Sequence |
---|
Protein Sequence Length: 432 Download |
MKLLGLIIFL AIVIQQSYWE LGADAFSSDG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA 60 SDPSQRSKIS AAFQEASRHG LTVARTWAFS DGGYRPLQYT PGSYNEDMFQ GLDFAIAEAR 120 RHGIKVILSF ANNYVSFGGK KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR 180 FNTFTKVHYK DDTTIMAWEL MNEPRCPSDP TGRTIQAWVT EMAAHVKSLD RNHLLEAGLE 240 GFYGQSSPQS KTLNPPGQFG TDFIANNRVP GIDFVTVHSY PDEWFVDSSE QAQMEFLNKW 300 IDAHIQDAQN VLQKPIIIAE FGKSEKKAGY SPAQRDIVYN TVYSKIYGSA KRGGAAAGGL 360 FWQLLGNGMD NFQDGYGIIL SQRSSSTVNV IAQQSRKLTL LRKIFARMIN VEKWKRAHQR 420 RVRKGAHKIQ N* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.006 | 188 | 280 | 104 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 8.0e-8 | 88 | 326 | 243 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 5.0e-24 | 35 | 341 | 308 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABB45852.1 | 0 | 1 | 431 | 1 | 431 | hypothetical protein [Thellungiella halophila] |
GenBank | ACN78662.1 | 0 | 1 | 412 | 1 | 409 | endo-beta-mannanase [Actinidia arguta] |
GenBank | ACU18982.1 | 0 | 1 | 420 | 1 | 415 | unknown [Glycine max] |
RefSeq | NP_201447.1 | 0 | 1 | 431 | 1 | 431 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002281804.1 | 0 | 1 | 424 | 1 | 419 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 26 | 401 | 1 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 41 | 376 | 22 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 41 | 376 | 22 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 41 | 376 | 22 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 41 | 376 | 22 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |