Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004286m |
Family | CBM43 |
Protein Properties | Length: 423 Molecular Weight: 45837.9 Isoelectric Point: 5.3296 |
Chromosome | Chromosome/Scaffold: 6 Start: 7654359 End: 7656685 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 344 | 421 | 5.8e-30 |
CIAKEKVDKKMLQAALDWACGPGKVDCSALMQGEACYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPS | |||
GH17 | 6 | 325 | 0 |
IGVNIGTEVTNMPSPTQVVTLLKSQNINRVRLYDADRSMLLAFAHTGIQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTTLP NAASVLVSALKYIQSALITANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLMLNVYPYFDYVQSNGVIPLDYALFQPLQAN KEAVDANTLLHYTNVFDAIVDAAYFAMSYLNFTNIPIVVTESGWPSKGDAKEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPG PVSEKNWGLFHTNGTPVYTL |
Full Sequence |
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Protein Sequence Length: 423 Download |
MSDSLIGVNI GTEVTNMPSP TQVVTLLKSQ NINRVRLYDA DRSMLLAFAH TGIQVIISVP 60 NDQLLGISQS NATAANWVTR NVAAYYPATN ITTIAVGSEV LTTLPNAASV LVSALKYIQS 120 ALITANLDRQ IKVSTPHSST IILDSFPPSQ AFFNKTWDPV IVPLLKFLQS TGSPLMLNVY 180 PYFDYVQSNG VIPLDYALFQ PLQANKEAVD ANTLLHYTNV FDAIVDAAYF AMSYLNFTNI 240 PIVVTESGWP SKGDAKEHDA TVENANTYNS NLIQHVINKT GTPKHPGTAV TTYIYELYNE 300 DTRPGPVSEK NWGLFHTNGT PVYTLRLAGA GAILANDTTN QTFCIAKEKV DKKMLQAALD 360 WACGPGKVDC SALMQGEACY EPDDVVAHST YAFNAYYQKM GKASGSCDFK GVATVTTTDP 420 SM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 25 | 318 | 304 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-21 | 342 | 414 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 342 | 422 | 81 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-100 | 6 | 325 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001077866.1 | 0 | 3 | 371 | 20 | 388 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_565269.1 | 0 | 3 | 421 | 20 | 438 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | XP_002314794.1 | 0 | 1 | 421 | 13 | 433 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 3 | 421 | 20 | 438 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 3 | 421 | 31 | 449 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 6 | 327 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 6 | 327 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 6 | 327 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 6 | 327 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 6 | 327 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DK466504 | 293 | 19 | 311 | 0 |
ES906306 | 271 | 3 | 273 | 0 |
EX086531 | 267 | 32 | 298 | 0 |
EX302541 | 307 | 4 | 310 | 0 |
DR951683 | 294 | 49 | 342 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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