Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10005040m |
Family | CBM43 |
Protein Properties | Length: 166 Molecular Weight: 17030.2 Isoelectric Point: 4.8569 |
Chromosome | Chromosome/Scaffold: 6 Start: 6927983 End: 6929349 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 99 | 5.6e-28 |
CLCRDGVGEKALQTSIDYACGALADCNPIHEKGPCYQPNDVKSHCDWAVNSYFQRAGQLAGSCNFSGTATTSPNPPST |
Full Sequence |
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Protein Sequence Length: 166 Download |
MRLLLGLLFL LALTSYSSAT YCLCRDGVGE KALQTSIDYA CGALADCNPI HEKGPCYQPN 60 DVKSHCDWAV NSYFQRAGQL AGSCNFSGTA TTSPNPPSTV VTGCIYPSSP GNAGTTPTTG 120 ALGTPTFPGP PAFGPTGVFD PSGNDALSLF TSLALTLGFS VFAFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-14 | 20 | 86 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-23 | 20 | 86 | 67 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79417.1 | 1.4013e-45 | 12 | 165 | 69 | 245 | AC068197_27 F16A14.5 [Arabidopsis thaliana] |
GenBank | ACU19899.1 | 8.40779e-45 | 1 | 118 | 1 | 117 | unknown [Glycine max] |
GenBank | ACU20773.1 | 9.94922e-44 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
RefSeq | NP_172838.2 | 0 | 19 | 165 | 19 | 185 | beta-1,3-glucanase-related [Arabidopsis thaliana] |
RefSeq | NP_671770.1 | 0 | 1 | 145 | 1 | 146 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000008 | 14 | 108 | 6 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |