y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10005350m |
Family | CBM43 |
Protein Properties | Length: 115 Molecular Weight: 12654.5 Isoelectric Point: 5.4592 |
Chromosome | Chromosome/Scaffold: 6 Start: 1698665 End: 1699009 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 29 | 110 | 2.2e-31 |
WCMAMRSATNEQLQSNIDFACSNGVDCSPIKPSGSCFEPNNMVDHASFVMNAYYHSHGRTVDACRFGGTSCFVFVDPSYDSC |
Full Sequence |
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Protein Sequence Length: 115 Download |
MSQFLTLLLL IILSTVAIQQ VPLVSCRQWC MAMRSATNEQ LQSNIDFACS NGVDCSPIKP 60 SGSCFEPNNM VDHASFVMNA YYHSHGRTVD ACRFGGTSCF VFVDPSYDSC VYYT* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-20 | 28 | 97 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-35 | 28 | 112 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10565.1 | 8e-33 | 1 | 92 | 1 | 89 | unnamed protein product [Arabidopsis thaliana] |
DDBJ | BAB10565.1 | 1.99965e-42 | 27 | 114 | 91 | 178 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001078361.1 | 2e-39 | 8 | 112 | 10 | 114 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001078788.1 | 0 | 21 | 114 | 17 | 110 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_201128.2 | 0 | 1 | 114 | 1 | 111 | unknown protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-23 | 29 | 112 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |