| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10005582m |
| Family | GT47 |
| Protein Properties | Length: 515 Molecular Weight: 59511.2 Isoelectric Point: 8.4217 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2148867 End: 2150411 |
| Description | glycosyltransferase 18 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 115 | 456 | 0 |
| CDSGRVFVYDMPKIFNEVILQQCDNLNPWSSRCDALSNDGFGKEATSLKGVIPDDLVPSWFWTDQFVSEIIFHNRILNHPCRTLDPGSATAFYIPFYAGL AVGQYLWSNYAATDRDRHCKMMTEWVREQPYWNRSNGWDHFITMGRITWDFRRSKDDDWGSNCIYTPGMRNITRLLIERNSWDHFDVGVPYPTGFHPRSD SDVVKWQDFVRNRRRETLFCFAGAPRAGIENDFRGLLLRHCEESRGACRTVDCTGGKCSNGSSAILETFLGSDFCLQPRGDSFTRRSIFDCMLAGSIPVF FWRRTAYMQYQWFLPNEPDSYSVFIDRNEVKNGTTSIREVLE | |||
| Full Sequence |
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| Protein Sequence Length: 515 Download |
| MLPVSNPSSP ERLLKKSRTP DTTTTTIDRK NSFNSLNSVG NSAVNRSSFI PTSRSHCTWL 60 ILSLLSLQLL LFLTLRSIPF PHRRSPENFP SPAAAASNHP LSTRIRPESD DSKRCDSGRV 120 FVYDMPKIFN EVILQQCDNL NPWSSRCDAL SNDGFGKEAT SLKGVIPDDL VPSWFWTDQF 180 VSEIIFHNRI LNHPCRTLDP GSATAFYIPF YAGLAVGQYL WSNYAATDRD RHCKMMTEWV 240 REQPYWNRSN GWDHFITMGR ITWDFRRSKD DDWGSNCIYT PGMRNITRLL IERNSWDHFD 300 VGVPYPTGFH PRSDSDVVKW QDFVRNRRRE TLFCFAGAPR AGIENDFRGL LLRHCEESRG 360 ACRTVDCTGG KCSNGSSAIL ETFLGSDFCL QPRGDSFTRR SIFDCMLAGS IPVFFWRRTA 420 YMQYQWFLPN EPDSYSVFID RNEVKNGTTS IREVLERYSK EDVRRMRERV IDLIPNLVYA 480 KSPHGLETFK DAFDVAIDGV FRRFKEQENW YKWR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-60 | 114 | 458 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA97186.1 | 0 | 1 | 512 | 1 | 515 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_201028.1 | 0 | 1 | 514 | 1 | 517 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002270309.1 | 0 | 1 | 513 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318866.1 | 0 | 1 | 513 | 1 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510893.1 | 0 | 1 | 513 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY290373 | 373 | 125 | 496 | 0 |
| BU238022 | 260 | 256 | 515 | 0 |
| DY267021 | 343 | 154 | 496 | 0 |
| EX091911 | 261 | 226 | 486 | 0 |
| BU238022 | 20 | 240 | 259 | 0.032 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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