Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10005832m |
Family | GH3 |
Protein Properties | Length: 645 Molecular Weight: 70169.8 Isoelectric Point: 7.177 |
Chromosome | Chromosome/Scaffold: 19 Start: 270236 End: 273472 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 118 | 346 | 0 |
STRLGIPLLYAIDAVHGHNTFINATIFPHNVGLGATRDPELVKKIGAITALEVRATGIAQAFAPCVAVCRDPRWGRCYESYSEDPKVVNMMTESIMDGLQ GSSPYCSDLKTKVAGCAKHFVGDGGTVDGINENNTVADNHTLFDIHMPPFEIAVKKGIASIMASYSSLNGVKMHANRAMITDYLKNTLKFQGFVISDWLG IDRITTPHKANYTYSIEASINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 645 Download |
MAATIYGVKS IFLSAAVVIL FASRYGGATA ANRGYIKYKD PNAAVEERVE DLLTRMTLPE 60 KLGQMCQVDR FNFSFFPTGP EIFTKYMIGS VLSNPYDTGA SPLKRVAVSN TMQKLSLSTR 120 LGIPLLYAID AVHGHNTFIN ATIFPHNVGL GATRDPELVK KIGAITALEV RATGIAQAFA 180 PCVAVCRDPR WGRCYESYSE DPKVVNMMTE SIMDGLQGSS PYCSDLKTKV AGCAKHFVGD 240 GGTVDGINEN NTVADNHTLF DIHMPPFEIA VKKGIASIMA SYSSLNGVKM HANRAMITDY 300 LKNTLKFQGF VISDWLGIDR ITTPHKANYT YSIEASINAG IDMVMVPFEY KEFLEKLTKL 360 VNGGYIPMSR IDDAVRRVLR VKFSLGLFEK PLAEETLAAE FGSEAHREVA REAVRKSMVL 420 LKNGKTDADK VVPLPKKVKK IVVAGQHANN MGWQCGGFTL TWQGFNGTGE NIGRNKALHL 480 PTGKTRGTTI LEAIKKAVDP TTEVVYVEEP NQDTAKLHAD AAYTIVVVGE APYAETQGDS 540 RTLGIADPGP DTLSHTCGSD MKCLVILVTG RPLVIEPYID MIDALAVAWL PGTEGQGVAD 600 VLFGDHPFTG TLPRTWMKSV VQLPMNVGDE NYDPLFPFGF GIKT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-33 | 418 | 642 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 9.0e-34 | 76 | 626 | 611 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 3.0e-82 | 49 | 642 | 648 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 8.0e-88 | 56 | 423 | 375 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-96 | 57 | 381 | 328 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 11 | 644 | 6 | 620 | unknown [Populus trichocarpa] |
RefSeq | NP_001051275.1 | 0 | 28 | 644 | 17 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 35 | 644 | 24 | 618 | exoglucanase1 [Zea mays] |
RefSeq | NP_191830.1 | 0 | 1 | 644 | 1 | 650 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002266470.1 | 0 | 35 | 644 | 25 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iex_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iew_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1iev_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1ieq_A | 0 | 35 | 644 | 2 | 599 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |