y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10005855m |
Family | CE8 |
Protein Properties | Length: 591 Molecular Weight: 63206.1 Isoelectric Point: 9.0891 |
Chromosome | Chromosome/Scaffold: 19 Start: 432553 End: 434947 |
Description | VANGUARD 1 homolog 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 280 | 573 | 0 |
VVAKDGSGQFKTVSEAVNACPEKNPGRCIIHIKAGIYNEQVTIPKKKNNIFMFGDGATKTIITFNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA GPLGHQAVALRVNGDRAVIFNCRFDAYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILIRKGTPGQSNYVTADGNEKGTAVKIGIVLHNCRI LRDKELEADKATIKSYLGRPWKQYATTVVIGTEISDVIQPEGWTEWKGEQFHKTARYIEFNNRGPGANTATRAPFAKVAKSAAEVEGFTVANWV |
Full Sequence |
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Protein Sequence Length: 591 Download |
MAVGKIVISV ASILLVVGVA IGVVTFVNRG DGGEKNAPLN SHQKAVQTIC QTTTDKGSCA 60 KTLEPVKSDD PSKLIKAFML ATKDAITKSS NFTASTEGGM GKNINATSKA VLDYCKRVLT 120 YALEDLETIV EEMGEDLQQS GTKLDQLKQW LTGVFNYQTD CLDDIEEVEL RKIMGEGISN 180 SKVLTSNAID IFHSVVTAMS QMGVKLDDMK NVTIGGVGAP ARRLLEDTDA KGLPKWFPSK 240 DRKLMAQAGR GGAPGGGAAA GDDGIGEGGG GGGKIKATHV VAKDGSGQFK TVSEAVNACP 300 EKNPGRCIIH IKAGIYNEQV TIPKKKNNIF MFGDGATKTI ITFNRSVKLS PGTTTSLSGT 360 VQVESEGFMA KWIGFKNTAG PLGHQAVALR VNGDRAVIFN CRFDAYQDTL YVNNGRQFYR 420 NIVVSGTVDF IFGKSATVIQ NSLILIRKGT PGQSNYVTAD GNEKGTAVKI GIVLHNCRIL 480 RDKELEADKA TIKSYLGRPW KQYATTVVIG TEISDVIQPE GWTEWKGEQF HKTARYIEFN 540 NRGPGANTAT RAPFAKVAKS AAEVEGFTVA NWVGPANWIQ EANVPVQLGL * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 3.0e-105 | 28 | 585 | 568 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 6.0e-109 | 25 | 590 | 571 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-133 | 280 | 574 | 301 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 3.0e-137 | 28 | 590 | 582 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 0 | 25 | 590 | 582 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV91510.1 | 0 | 30 | 590 | 32 | 588 | VGD1-like protein 2 [Arabidopsis thaliana] |
GenBank | ABC25451.1 | 0 | 1 | 590 | 1 | 585 | pollen development related protein [Brassica rapa subsp. chinensis] |
RefSeq | NP_191776.1 | 0 | 30 | 590 | 32 | 588 | VGDH2 (Vanguard 1 homolog 2); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | P41510 | 0 | 1 | 590 | 1 | 584 | PME_BRANA RecName: Full=Probable pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase; Flags: Precursor |
Swiss-Prot | Q42608 | 0 | 14 | 590 | 1 | 571 | PME_BRACM RecName: Full=Pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 280 | 590 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 275 | 590 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 5e-22 | 280 | 573 | 7 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 5e-22 | 280 | 573 | 7 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 5e-22 | 280 | 573 | 7 | 338 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |