| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10005870m |
| Family | AA3 |
| Protein Properties | Length: 549 Molecular Weight: 59725.3 Isoelectric Point: 7.4239 |
| Chromosome | Chromosome/Scaffold: 19 Start: 2696831 End: 2699301 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 40 | 543 | 0 |
| APKVSHFDYIVIGGGTAGCALAATLSQNATVLVLERGGSPYDNPTATDIGNFANTLLNSTWSQLFISQDGVFNSRARVLGGGTVLNAGFYSRAEDDYVAE AGWERNEVEAAYEWVEKKVAFEPQVKGWQTAFRDALLEAGVAPYNGFTYGHIHGTKIGGTIFDRDGHRHTAADLLEYANQNTIVVYLHASVHKILFTTTK GTSRPKANGVIFRDRNGVFHTAQLAAAQNALINEVILSPQLLMLSGIGPAAHLAYHGVNPIILDHPMVGQGMGDNPMNPVFIPSPEPVEVSLVQAVGIPN FGSYIEGGSGLSVSISLTRAFFDGVLNLLNKEKLPTQSISNFLKSFNIRLNLKTKAGVIIQKVAGPISRDPKDLNNCVEGLSAIIKVIDSKGYSKYKYPG VTGRGLLNLILALPINLRPRHLTSTFDLKQYCIDTTMTIYHYHGGCQVGKVVDNDYKVLGVDALRVIDASTFLKSPGTNPQATIMMLGRYMGQKILRERA DFLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 549 Download |
| MDYYIFRLFR LILVAIFIFQ GSCYSDQAGG YGFLKDATLA PKVSHFDYIV IGGGTAGCAL 60 AATLSQNATV LVLERGGSPY DNPTATDIGN FANTLLNSTW SQLFISQDGV FNSRARVLGG 120 GTVLNAGFYS RAEDDYVAEA GWERNEVEAA YEWVEKKVAF EPQVKGWQTA FRDALLEAGV 180 APYNGFTYGH IHGTKIGGTI FDRDGHRHTA ADLLEYANQN TIVVYLHASV HKILFTTTKG 240 TSRPKANGVI FRDRNGVFHT AQLAAAQNAL INEVILSPQL LMLSGIGPAA HLAYHGVNPI 300 ILDHPMVGQG MGDNPMNPVF IPSPEPVEVS LVQAVGIPNF GSYIEGGSGL SVSISLTRAF 360 FDGVLNLLNK EKLPTQSISN FLKSFNIRLN LKTKAGVIIQ KVAGPISRDP KDLNNCVEGL 420 SAIIKVIDSK GYSKYKYPGV TGRGLLNLIL ALPINLRPRH LTSTFDLKQY CIDTTMTIYH 480 YHGGCQVGKV VDNDYKVLGV DALRVIDAST FLKSPGTNPQ ATIMMLGRYM GQKILRERAD 540 FLETEEEA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2303 | BetA | 1.0e-9 | 466 | 539 | 79 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| TIGR03970 | Rv0697 | 4.0e-12 | 114 | 315 | 225 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 2.0e-13 | 45 | 361 | 359 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 1.0e-15 | 409 | 527 | 124 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| PLN02785 | PLN02785 | 1.0e-162 | 46 | 538 | 534 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11043.1 | 0 | 1 | 528 | 1 | 563 | mandelonitrile lyase-like protein [Arabidopsis thaliana] |
| EMBL | CAB87405.1 | 0 | 1 | 528 | 1 | 557 | ADHESION OF CALYX EDGES-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001119417.1 | 0 | 34 | 548 | 1 | 553 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200008.1 | 0 | 1 | 548 | 1 | 586 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_567032.1 | 0 | 1 | 547 | 1 | 576 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ju2_B | 0 | 33 | 539 | 14 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 1ju2_A | 0 | 33 | 539 | 14 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_B | 0 | 33 | 539 | 14 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_A | 0 | 33 | 539 | 14 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdn_B | 0 | 33 | 539 | 14 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
