y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10006265m |
Family | CBM43 |
Protein Properties | Length: 180 Molecular Weight: 19080.7 Isoelectric Point: 6.4843 |
Chromosome | Chromosome/Scaffold: 19 Start: 1864560 End: 1865958 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 41 | 124 | 6e-32 |
WCVAKNNAEDSSLQTAIDWACGQGGADCGPIQQGGPCNDPTDIQKMASYVFNNYYLKNGLADDACNFDNNAALTSINPSQGTCK |
Full Sequence |
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Protein Sequence Length: 180 Download |
MVMSLSRCFH LHLSLLAATA TMLMVVAAAQ AGGQVLQVEL WCVAKNNAED SSLQTAIDWA 60 CGQGGADCGP IQQGGPCNDP TDIQKMASYV FNNYYLKNGL ADDACNFDNN AALTSINPSQ 120 GTCKYPSSKR VSNGRVAEDT SMGAGQADMS HGRRISSNWI LAFIGFGSIL LTMTRIIHL* 180 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-15 | 40 | 99 | 66 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-29 | 40 | 125 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 0 | 1 | 178 | 42 | 218 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 0 | 1 | 178 | 77 | 254 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 0 | 1 | 178 | 1 | 178 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 25 | 164 | 20 | 162 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525141.1 | 0 | 29 | 156 | 21 | 153 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-18 | 41 | 127 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |