| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10007089m |
| Family | GT5 |
| Protein Properties | Length: 619 Molecular Weight: 67805.2 Isoelectric Point: 8.775 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2119532 End: 2123570 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 94 | 590 | 0 |
| VIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIRVGDNVESVRFFHCYKRGVDRVFVDHPIFLAKVWGKTGSKIYG PITGVDYTDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFSFEDYSLLNLPN SFKSSFDFMDGYEKPVKGRKINWMKAAILEADRVLTVSPYYAQELISGIDRGVELHSHLRMKTVSGIINGMDVQEWNPATDKYIDIKYDKTTVTDAKPLI KEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRF EPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGFTGFHIGRFNVKCEVVDPEDVIATAKAVARAVTVYGTSTMKDMVKNCMDQDFSWKGPARLWEKVL | |||
| Full Sequence |
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| Protein Sequence Length: 619 Download |
| MATVTASHFA SRASLVNNHG GSASGFESNA NLSQITLKGQ SMTHCGLRSF NMVDRLQRRS 60 QAKAVSVKSS KWSKQNTSKA KPAGKIVCEK GMSVIFIGAE VGPWSKTGGL GDVLGGLPPA 120 LAARGHRVMT ICPRYDQYKD AWDTCVVVQI RVGDNVESVR FFHCYKRGVD RVFVDHPIFL 180 AKVWGKTGSK IYGPITGVDY TDNQLRFSLL CQAALEAPRV LNLNSSKYFS GPYGEDVVFV 240 ANDWHTALLP CYLKSMYQSR GVYMNAKVVF CIHNIAYQGR FSFEDYSLLN LPNSFKSSFD 300 FMDGYEKPVK GRKINWMKAA ILEADRVLTV SPYYAQELIS GIDRGVELHS HLRMKTVSGI 360 INGMDVQEWN PATDKYIDIK YDKTTVTDAK PLIKEALQAA VGLPVDRDVP VIGFIGRLEE 420 QKGSDILVEA ISKFMGLNVQ MVILGTGKKK MEAQILELEE KFPGKAVGVA KFNVPLAHMI 480 TAGADFIIVP SRFEPCGLIQ LHAMRYGTVP IVASTGGLVD TVKDGFTGFH IGRFNVKCEV 540 VDPEDVIATA KAVARAVTVY GTSTMKDMVK NCMDQDFSWK GPARLWEKVL LSLDVAGSEA 600 GTDGEEIAPM AKENVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 5.0e-82 | 188 | 593 | 413 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-102 | 92 | 583 | 510 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 4.0e-126 | 92 | 584 | 503 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 4.0e-166 | 92 | 593 | 508 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-168 | 94 | 590 | 510 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACM78591.1 | 0 | 1 | 618 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 1 | 618 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| RefSeq | NP_174566.1 | 0 | 1 | 618 | 1 | 610 | starch synthase, putative [Arabidopsis thaliana] |
| Swiss-Prot | O82627 | 0 | 1 | 618 | 1 | 608 | SSG1_ANTMA RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| RefSeq | XP_002300507.1 | 0 | 1 | 618 | 1 | 610 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 92 | 618 | 10 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3vue_A | 0 | 92 | 618 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 92 | 593 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 92 | 595 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 92 | 595 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 619 | 1 | 619 | 0 |
| CN831271 | 382 | 238 | 619 | 0 |
| HO825853 | 518 | 100 | 617 | 0 |
| HO629148 | 544 | 77 | 619 | 0 |
| HO778340 | 381 | 81 | 459 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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