y
Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10007176m |
Family | AA1 |
Protein Properties | Length: 584 Molecular Weight: 65599.8 Isoelectric Point: 9.2641 |
Chromosome | Chromosome/Scaffold: 5 Start: 9289707 End: 9292195 |
Description | laccase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 30 | 570 | 0 |
TTRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPSVVVHEGDTVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTL LWHAHHSWQRASVYGAFIIYPRRPYPFSGSHIQSEIPIILGEWWNDDVDKVEKEMMKTGAGAKVSDAYTLNGLPGPLYPCSSTKDTFTATVDAGKTYILR IINAALNNELFFAVSNHTLTVVEVDAVYTKPVHTKAIMIAPGQTTTLLLRTDQRSGGEFLIAATPYVTSVFPFDNSTTVGFLRYNGKNKSVNYVNRRRLT TTLSTRAVLPDMLDTKFATRFSESIKSLGSTEYPCKVPTAIDKRVITTISLNLQDCPSNRTCDGYNGKSFFASMNNISFVRPPISILESYFKKQSKGVFT LDFPENPRNRFDFTGVNPVTENMNAEFGTKLFEVEFGARLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDPEKDPARYNLVDPPERNTIAVPTGG WAAIRINADNPGVWFIHCHLEQHTSWGLAMGFIVKDGPLPS |
Full Sequence |
---|
Protein Sequence Length: 584 Download |
MKKMENFGIL VISTSLLMFA TLLPYSSAST TRRFHFNVEW KKVTRLCHTK QLLTVNGQYP 60 GPSVVVHEGD TVEIKVTNRI AHNTTIHWHG LRQYRTGWAD GPAYITQCPI RSKQSYTYRF 120 KVEDQRGTLL WHAHHSWQRA SVYGAFIIYP RRPYPFSGSH IQSEIPIILG EWWNDDVDKV 180 EKEMMKTGAG AKVSDAYTLN GLPGPLYPCS STKDTFTATV DAGKTYILRI INAALNNELF 240 FAVSNHTLTV VEVDAVYTKP VHTKAIMIAP GQTTTLLLRT DQRSGGEFLI AATPYVTSVF 300 PFDNSTTVGF LRYNGKNKSV NYVNRRRLTT TLSTRAVLPD MLDTKFATRF SESIKSLGST 360 EYPCKVPTAI DKRVITTISL NLQDCPSNRT CDGYNGKSFF ASMNNISFVR PPISILESYF 420 KKQSKGVFTL DFPENPRNRF DFTGVNPVTE NMNAEFGTKL FEVEFGARLE IVFQGTSFLN 480 IENHPLHVHG HNFFVVGRGF GNFDPEKDPA RYNLVDPPER NTIAVPTGGW AAIRINADNP 540 GVWFIHCHLE QHTSWGLAMG FIVKDGPLPS QTLLPPPRDF PSC* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 3.0e-53 | 37 | 153 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-59 | 16 | 573 | 587 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 5.0e-67 | 4 | 570 | 604 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-75 | 31 | 573 | 573 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 583 | 555 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF78389.1 | 0 | 38 | 583 | 30 | 576 | AC069551_22 T10O22.11 [Arabidopsis thaliana] |
RefSeq | NP_173252.2 | 0 | 4 | 583 | 1 | 581 | LAC1 (Laccase 1); laccase [Arabidopsis thaliana] |
RefSeq | XP_002281603.1 | 0 | 11 | 583 | 11 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317883.1 | 0 | 5 | 583 | 6 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322091.1 | 0 | 24 | 583 | 23 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 573 | 1 | 536 | D Chain D, Rhodobacter Capsulatus Cytochrome Bc1 Complex With Stigmatellin Bound |
PDB | 1asq_A | 0 | 29 | 573 | 1 | 536 | D Chain D, Rhodobacter Capsulatus Cytochrome Bc1 Complex With Stigmatellin Bound |
PDB | 1asp_B | 0 | 29 | 573 | 1 | 536 | D Chain D, Rhodobacter Capsulatus Cytochrome Bc1 Complex With Stigmatellin Bound |
PDB | 1asp_A | 0 | 29 | 573 | 1 | 536 | D Chain D, Rhodobacter Capsulatus Cytochrome Bc1 Complex With Stigmatellin Bound |
PDB | 1aso_B | 0 | 29 | 573 | 1 | 536 | D Chain D, Rhodobacter Capsulatus Cytochrome Bc1 Complex With Stigmatellin Bound |