Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10007361m |
Family | AA1 |
Protein Properties | Length: 525 Molecular Weight: 58500.7 Isoelectric Point: 9.7623 |
Chromosome | Chromosome/Scaffold: 5 Start: 8476359 End: 8479245 |
Description | SKU5 similar 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 484 | 0 |
QQQGILINKMFPGPEIRSVTNDNLIINVFNKLDEPFLISWGGIQNRKNSYQDGMYATTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGGIRI STRPLTPVPFPPPADDYTLLIGDWFKSNHKALRTQLDNGGKLPFPDGILINGRGSGATLNIQPGKTYRLRISNVGLQNSLNFRIQNHVMKLVEVEGTHTV QNVFSSLDVHVGQSYSVLITANQPAKDYYIVVSCRFTPKVLTTTGVLHYSNSAGPVSGPIPGAPTMLSWSFNQARAIRTNLTASGPRPNPQGSYHYGMVK VTRTIKLVNSAGQIKGKQRYGVNSASFYPADTPLKLADYFKINGVYKLGSISEQPTNKPIFPATSVLQADYRDFVEIVFENRESIVQSWHFNGYSFFVVG MELGKWSPASRKVYNLNDAVSRCTVQVYPRSWTAIYVALDNVGMWNLRSES |
Full Sequence |
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Protein Sequence Length: 525 Download |
MGLLSHIIAI AAEDPYKFFE WHVTYGTISP MGVQQQGILI NKMFPGPEIR SVTNDNLIIN 60 VFNKLDEPFL ISWGGIQNRK NSYQDGMYAT TCPIPPGKNY TYALQVKDQI GSFYYFPSLG 120 FHKAAGGFGG IRISTRPLTP VPFPPPADDY TLLIGDWFKS NHKALRTQLD NGGKLPFPDG 180 ILINGRGSGA TLNIQPGKTY RLRISNVGLQ NSLNFRIQNH VMKLVEVEGT HTVQNVFSSL 240 DVHVGQSYSV LITANQPAKD YYIVVSCRFT PKVLTTTGVL HYSNSAGPVS GPIPGAPTML 300 SWSFNQARAI RTNLTASGPR PNPQGSYHYG MVKVTRTIKL VNSAGQIKGK QRYGVNSASF 360 YPADTPLKLA DYFKINGVYK LGSISEQPTN KPIFPATSVL QADYRDFVEI VFENRESIVQ 420 SWHFNGYSFF VVGMELGKWS PASRKVYNLN DAVSRCTVQV YPRSWTAIYV ALDNVGMWNL 480 RSESWERQYL GQQLYMRVYT TSTSLRDEYQ IPTNALLCGR AIKD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 1 | 521 | 521 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 8 | 519 | 521 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 1 | 522 | 523 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 1 | 521 | 526 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 15 | 520 | 519 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 4 | 521 | 15 | 533 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 4 | 521 | 15 | 533 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_173603.1 | 0 | 1 | 521 | 13 | 533 | sks8 (SKU5 Similar 8); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_173604.1 | 0 | 4 | 521 | 15 | 533 | sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_177743.1 | 0 | 4 | 521 | 15 | 533 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 17 | 523 | 4 | 543 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1asq_A | 0 | 17 | 523 | 4 | 543 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1asp_B | 0 | 17 | 523 | 4 | 543 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1asp_A | 0 | 17 | 523 | 4 | 543 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1aso_B | 0 | 17 | 523 | 4 | 543 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX136414 | 308 | 210 | 517 | 0 |
HO801725 | 436 | 90 | 522 | 0 |
DY262568 | 355 | 48 | 400 | 0 |
DN795140 | 291 | 100 | 389 | 0 |
JK988093 | 300 | 200 | 498 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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