Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10007769m |
Family | GH5 |
Protein Properties | Length: 412 Molecular Weight: 46403.7 Isoelectric Point: 7.9318 |
Chromosome | Chromosome/Scaffold: 5 Start: 15155706 End: 15158181 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 366 | 5.7e-35 |
NGERVYLNGFNAYWMMTTAADTASRGRATVTTALRQASAVGMNVARIWGFNEGDYIPLQISPGSYSEDVFKGLDFVVYEAGRFKIKLIISLVNNFEDYGG RKKYVEWAGFNETDEFYTNSVVKEFYKNHVKTVLTRKNTISGRIYKDDPTIFSWELINEPRCNDSTGSTILQNWVKEMAAYVKSIDSNHLLEIGLEGFYG ESKPERTVYNPGGTVLTGSDFISNNQIPEIDFATIHVYPDSWLPLQMSRRAEQDAFVDKWIGAHIEDSDNIIKKPLLITEFGKSSKFPGFTLEKRNKFFK RVYDVIYDSARTGGSCNGGIFWQLTTN |
Full Sequence |
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Protein Sequence Length: 412 Download |
MLKLLPCFFF LLPFLVGNNR ICVAQKAGFV GSNGTQFVLN GERVYLNGFN AYWMMTTAAD 60 TASRGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG 120 RFKIKLIISL VNNFEDYGGR KKYVEWAGFN ETDEFYTNSV VKEFYKNHVK TVLTRKNTIS 180 GRIYKDDPTI FSWELINEPR CNDSTGSTIL QNWVKEMAAY VKSIDSNHLL EIGLEGFYGE 240 SKPERTVYNP GGTVLTGSDF ISNNQIPEID FATIHVYPDS WLPLQMSRRA EQDAFVDKWI 300 GAHIEDSDNI IKKPLLITEF GKSSKFPGFT LEKRNKFFKR VYDVIYDSAR TGGSCNGGIF 360 WQLTTNRTGL LGDGYEVFMQ QGPNTTARLV AEQSSKLRNL KYPPLVTHSV E* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.008 | 184 | 277 | 103 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
COG2730 | BglC | 0.007 | 80 | 366 | 310 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-5 | 40 | 325 | 290 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 5.0e-27 | 37 | 327 | 294 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 4 | 400 | 10 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 30 | 400 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | NP_171733.2 | 0 | 16 | 411 | 16 | 411 | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002302695.1 | 0 | 2 | 399 | 1 | 402 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 22 | 400 | 22 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 29 | 400 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 38 | 364 | 21 | 343 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 38 | 364 | 21 | 343 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 38 | 364 | 21 | 343 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 38 | 364 | 21 | 343 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |