| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10007963m |
| Family | CE11 |
| Protein Properties | Length: 373 Molecular Weight: 40651.7 Isoelectric Point: 7.5817 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6077956 End: 6081138 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 85 | 369 | 0 |
| QQTLAGCVEVKGKSLHSGKLSTVKLLPEIAGAGRYFDFRSRSIPASIEFAQESPLCTTLLKDGLKIRTVEHLLSTLEAKGVDNCRIRIDSEHADDQEVEV PIFDGSAKEWVDAIEEVGINVAQNHVGESVEKMVAHLNKPVHVWKNDSFVAAYPALETRITCGIDFPQVPAIGCQWFSWKPLHESSYAKDIAPSRTFCVY EEVEKMREAGLIKGGSLDNAIVCSAEHGWMNPPLRFDNEACRHKILDLIGDLSLVARGGNGGLPVAHIVAFKAGHALHTDLARRL | |||
| Full Sequence |
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| Protein Sequence Length: 373 Download |
| MSAKQRDSVI SANSNLTCIN PNIGLHMVAL IAKKNRLHRV TVESMNLSVA VVKAKNSTLI 60 SWMRLSSFSS AASSTVSLNP IGRLQQTLAG CVEVKGKSLH SGKLSTVKLL PEIAGAGRYF 120 DFRSRSIPAS IEFAQESPLC TTLLKDGLKI RTVEHLLSTL EAKGVDNCRI RIDSEHADDQ 180 EVEVPIFDGS AKEWVDAIEE VGINVAQNHV GESVEKMVAH LNKPVHVWKN DSFVAAYPAL 240 ETRITCGIDF PQVPAIGCQW FSWKPLHESS YAKDIAPSRT FCVYEEVEKM REAGLIKGGS 300 LDNAIVCSAE HGWMNPPLRF DNEACRHKIL DLIGDLSLVA RGGNGGLPVA HIVAFKAGHA 360 LHTDLARRLN MD* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 2.0e-67 | 85 | 369 | 318 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 6.0e-75 | 85 | 369 | 291 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam03331 | LpxC | 3.0e-86 | 85 | 369 | 291 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 5.0e-90 | 83 | 369 | 295 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 6.0e-109 | 85 | 369 | 290 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG03128.1 | 0 | 33 | 356 | 226 | 542 | AC004133_22 F5A9.8 [Arabidopsis thaliana] |
| GenBank | AAG03130.1 | 0 | 33 | 356 | 226 | 548 | AC004133_24 F5A9.4 [Arabidopsis thaliana] |
| DDBJ | BAD94001.1 | 0 | 45 | 372 | 1 | 326 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 0 | 45 | 372 | 1 | 326 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 42 | 372 | 41 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 1e-34 | 85 | 372 | 7 | 280 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4fw7_C | 1e-34 | 85 | 372 | 7 | 280 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4fw7_B | 1e-34 | 85 | 372 | 7 | 280 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4fw7_A | 1e-34 | 85 | 372 | 7 | 280 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4fw6_D | 1e-34 | 85 | 372 | 7 | 280 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FY448967 | 244 | 46 | 286 | 0 |
| BX837978 | 156 | 191 | 346 | 0 |
| BX837978 | 134 | 52 | 184 | 0 |
| CK277774 | 289 | 56 | 344 | 0 |
| CK277774 | 25 | 346 | 370 | 0.092 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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