Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10008089m |
Family | GH17 |
Protein Properties | Length: 348 Molecular Weight: 36633.7 Isoelectric Point: 6.9606 |
Chromosome | Chromosome/Scaffold: 5 Start: 2144024 End: 2146336 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 3 | 259 | 0 |
DPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLADNLLPAMQGVHSALITAGLSDQIAVTTAHSLSILQTSFPPSAGEFHPDLIDTLKPILEFH RKTDSPFLINAYPFFAYKGNPKEIPLDFVLFQPNQGIVDPATGFRYENMLFSQIDAVYSALAAAGYKSLKVQISETGWPSKGDDDEFGATPENAKRYNGN LIKMMMGKKTKTPLRPNNDLIVYVFALFNENMKPGPTSERNYGLFKPDGTQAYSLGF |
Full Sequence |
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Protein Sequence Length: 348 Download |
MRDPSKALTW IKQNVTPFLP ATNITCITIG NEILALNDSS LADNLLPAMQ GVHSALITAG 60 LSDQIAVTTA HSLSILQTSF PPSAGEFHPD LIDTLKPILE FHRKTDSPFL INAYPFFAYK 120 GNPKEIPLDF VLFQPNQGIV DPATGFRYEN MLFSQIDAVY SALAAAGYKS LKVQISETGW 180 PSKGDDDEFG ATPENAKRYN GNLIKMMMGK KTKTPLRPNN DLIVYVFALF NENMKPGPTS 240 ERNYGLFKPD GTQAYSLGFT LNDVVKGSSG GDDGGNSSSG GGGGGGGGGG GGGGGGGKMP 300 VSPVMPVAPD SASTGYLAIS SAPGKRKGTV AILLMMVSML LGERRFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-7 | 11 | 236 | 230 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-77 | 3 | 259 | 257 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF31288.1 | 0 | 1 | 323 | 90 | 401 | AC006424_17 CDS [Arabidopsis thaliana] |
RefSeq | NP_174563.2 | 0 | 1 | 344 | 90 | 424 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278950.1 | 0 | 1 | 333 | 88 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 1 | 258 | 76 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 343 | 87 | 402 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 1 | 260 | 63 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 1 | 260 | 63 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 1 | 260 | 63 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 1 | 260 | 63 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 1 | 260 | 63 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF119322 | 265 | 1 | 265 | 0 |
EX299471 | 258 | 1 | 258 | 0 |
EX658320 | 252 | 1 | 252 | 0 |
EE066625 | 241 | 1 | 241 | 0 |
CK272869 | 250 | 1 | 250 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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