Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10008139m |
Family | CBM43 |
Protein Properties | Length: 337 Molecular Weight: 32257.4 Isoelectric Point: 4.4189 |
Chromosome | Chromosome/Scaffold: 5 Start: 5015601 End: 5017451 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 169 | 250 | 6.6e-34 |
WCIAKANASPTSLQVALDYACGYGGADCGQIQQGASCYEPNTIRDHASFAFNSYYQKHPGSDSCNFGGAAQLTSTDPSKGSC |
Full Sequence |
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Protein Sequence Length: 337 Download |
MTHRLAPRCF QIMLLCLLIT SPIDVIAQGG QGDIPVVNPT SPGGSTTTPT ITQPSPPSTT 60 FPGPITNPNT PTGGYPPLDG TPPTGGGYPP LDGTTPTGGY PPLDGTTPTG GGAPGGGGGG 120 GDTGAGGGGG APGGGGGGDT GAGGGGATGG GGGGDTGAGG GGGGGGGQWC IAKANASPTS 180 LQVALDYACG YGGADCGQIQ QGASCYEPNT IRDHASFAFN SYYQKHPGSD SCNFGGAAQL 240 TSTDPSKGSC RFSSSSGTVS TSPPSQPSPP DFSSPPSTTY PPPITTPTIG IPGSGPPFGV 300 AEPTGLPSSA TTVSHSFLSI FTAIGILMPL LRQNYL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-21 | 168 | 238 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-33 | 168 | 244 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG51737.1 | 0 | 1 | 249 | 1 | 228 | AC068667_16 beta-1,3 glucanase, putative; 26636-27432 [Arabidopsis thaliana] |
GenBank | ABK94231.1 | 2.00386e-43 | 3 | 336 | 38 | 304 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 2e-38 | 167 | 336 | 33 | 195 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_174231.2 | 0 | 1 | 336 | 1 | 315 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002519744.1 | 2.8026e-45 | 166 | 336 | 112 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 165 | 257 | 9 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |