Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10009515m |
Family | CE8 |
Protein Properties | Length: 278 Molecular Weight: 30519.6 Isoelectric Point: 7.6245 |
Chromosome | Chromosome/Scaffold: 5 Start: 11701284 End: 11702224 |
Description | methylesterase PCR A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 274 | 0 |
LVVAKDGTGNFRTVKEAVAAAPEKSQKRFIIFVKEGTYDEIVQIGENKTNITIIGDGGDKTILTGSLNWKDGTKTFDSATLAVDGDGFMAQGICIQNTAG PAKEQAVALRVSGDMSVFYKCCIKAYQDTLYAHKNRQFYRECFITGTVDFICGNALAVFQRCQIEARKPGENQKNMITAQQCNDKRQKSAFSIQRCEIKA APDLAPFKGNVTTFLGRPWGVLSTVVIMQSFLDDFIDPAGWAPWESDKEPRLSTLYYGEYENTGPGK |
Full Sequence |
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Protein Sequence Length: 278 Download |
AFNNKPDLVV AKDGTGNFRT VKEAVAAAPE KSQKRFIIFV KEGTYDEIVQ IGENKTNITI 60 IGDGGDKTIL TGSLNWKDGT KTFDSATLAV DGDGFMAQGI CIQNTAGPAK EQAVALRVSG 120 DMSVFYKCCI KAYQDTLYAH KNRQFYRECF ITGTVDFICG NALAVFQRCQ IEARKPGENQ 180 KNMITAQQCN DKRQKSAFSI QRCEIKAAPD LAPFKGNVTT FLGRPWGVLS TVVIMQSFLD 240 DFIDPAGWAP WESDKEPRLS TLYYGEYENT GPGKSSP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-107 | 4 | 276 | 273 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 8.0e-113 | 3 | 273 | 273 | + pectinesterase | ||
PLN02488 | PLN02488 | 2.0e-121 | 7 | 273 | 267 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-128 | 3 | 273 | 271 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-147 | 7 | 273 | 267 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF23891.1 | 0 | 5 | 273 | 215 | 481 | pectin methyl esterase [Solanum tuberosum] |
EMBL | CAD29733.1 | 0 | 5 | 273 | 239 | 507 | pectin methylesterase [Sesbania rostrata] |
RefSeq | NP_172604.1 | 0 | 1 | 250 | 39 | 288 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_172624.1 | 0 | 7 | 273 | 246 | 510 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 7 | 273 | 246 | 510 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 9 | 276 | 6 | 271 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 6 | 276 | 7 | 275 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 6e-23 | 18 | 231 | 18 | 250 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 6e-23 | 18 | 231 | 18 | 250 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 6e-23 | 18 | 231 | 18 | 250 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EB452110 | 267 | 10 | 276 | 0 |
CO483304 | 270 | 7 | 276 | 0 |
DT759654 | 267 | 7 | 273 | 0 |
GO241839 | 258 | 16 | 273 | 0 |
GO241843 | 258 | 16 | 273 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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