Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10010213m |
Family | GH3 |
Protein Properties | Length: 613 Molecular Weight: 66957.8 Isoelectric Point: 5.5517 |
Chromosome | Chromosome/Scaffold: 16 Start: 4761140 End: 4763952 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 87 | 322 | 0 |
LASRLGIPIIYGIDAVHGNNDVYGATVFPHNIGLGATRDADLVRRIGAATALEVRAIGAHLAFAPCVATVKDPRWGRCYESYGEVPTIVSEMTSLVSGLQ GQPPKEHLNGYPFVAGRKNVVACAKHFVGDGGTYKGKNEGNTILSYEDLRRIHIAPYKKCIEQGVSTVMASYSSWNGDKLHSHYLLLTEVLKQELGFKGY LASDWEGLDRLSDPPGSNYRNCVKIGINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 613 Download |
MVDNEKSCVY KNPDAPVEAR VQDLLSRMTL PEKIGQMTQI ERTVASPAAI TDFFIGSVLN 60 AAGSWPLEDA RPSDWADMID GFQRSALASR LGIPIIYGID AVHGNNDVYG ATVFPHNIGL 120 GATRDADLVR RIGAATALEV RAIGAHLAFA PCVATVKDPR WGRCYESYGE VPTIVSEMTS 180 LVSGLQGQPP KEHLNGYPFV AGRKNVVACA KHFVGDGGTY KGKNEGNTIL SYEDLRRIHI 240 APYKKCIEQG VSTVMASYSS WNGDKLHSHY LLLTEVLKQE LGFKGYLASD WEGLDRLSDP 300 PGSNYRNCVK IGINAGIDMV MVPFKYERFI QDLIDLVESG EVPMARVDDA VERILRVKFV 360 AGLFEHPFTN RFLFPAVGCK EHRELAREAV RKSLVLLKNG KCGPFLPLDC NAKRILVVGT 420 HADDLGYQCG GWTKTMFGQS GRITIGTTLL DAIKATVGDK TEVVFEKTPS EKTLASSERF 480 SYAIVAVGEP PYAETKGDNS ELIIPFNGSE IVTAVAEKIP TLMILFSGRP MVLEPKVLEK 540 TEALVAAWLP GTEGQGIADV IFGDYDFQGK LPMSWFKSVD QLPLDIEANG YFPLFPLGFG 600 LSCDAMENSK QV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-48 | 12 | 585 | 622 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-50 | 394 | 602 | 226 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-83 | 29 | 357 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-84 | 28 | 441 | 421 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 5.0e-88 | 12 | 602 | 671 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25449.1 | 0 | 28 | 604 | 1 | 579 | At3g47010 [Arabidopsis thaliana] |
RefSeq | NP_190284.1 | 0 | 1 | 602 | 1 | 604 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190285.3 | 0 | 5 | 604 | 6 | 607 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_190288.1 | 0 | 1 | 608 | 1 | 635 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190289.1 | 0 | 1 | 612 | 1 | 612 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 9 | 607 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX132989 | 299 | 56 | 354 | 0 |
EX134175 | 295 | 313 | 605 | 0 |
DY265467 | 328 | 136 | 461 | 0 |
HO784016 | 429 | 56 | 481 | 0 |
HO784016 | 48 | 10 | 57 | 0.00000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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