| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10010220m |
| Family | CE8 |
| Protein Properties | Length: 603 Molecular Weight: 66075 Isoelectric Point: 9.3045 |
| Chromosome | Chromosome/Scaffold: 16 Start: 3139958 End: 3144134 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 288 | 584 | 0 |
| DIIVSKDGNGTCKTISEAIKKAPQYSTRRTIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTATFAATGAGFIARDITFQNW AGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDLQKNTITAQNRKDPNQNTGISIHASRV LATPDLLATNGTIQTFLGRPWKQFSRAVYMLSYIGNHVHTRGWLEWNTTFALETLYYGEYLNTGPGSNITQRVNWPGYRVINSTAEANRFTVAEFIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 603 Download |
| MGYERLGPSK PSGSVTTTTA PSPNLNQVST SAQPENINRR RKKLLVSSII VAFALIFAAA 60 IFAGIRTQLK SSQHVPGLAR KPSQAISKAC ELTRFPELCV DSLMDFPGSL AASSAKDLIH 120 VTVNMTLHHF SHALYSSSSF SFLHMPPRVR SAYDSCIELL DDSVDALSRA LSSVVSGGKT 180 KPQDVTTWLS SALTNQDTCA EGFDGVDDGG VKDQMTAALK NLSELVSNCL AIFAASGDGD 240 GNDFAGVPIQ NRRLLEVEGS ERDEKFPRWT KRREREILEM PVSQIQADII VSKDGNGTCK 300 TISEAIKKAP QYSTRRTIIY VKAGRYEENN LKVGRKKINL MFVGDGKGKT VISGGKSIFD 360 NITTFHTATF AATGAGFIAR DITFQNWAGP AKHQAVALRI GADHAVIYRC NIIGYQDTLY 420 VHSNRQFFRE CDIYGTVDFI FGNAAVVLQN CSIYARKPMD LQKNTITAQN RKDPNQNTGI 480 SIHASRVLAT PDLLATNGTI QTFLGRPWKQ FSRAVYMLSY IGNHVHTRGW LEWNTTFALE 540 TLYYGEYLNT GPGSNITQRV NWPGYRVINS TAEANRFTVA EFIYGSSWLP STGVSFLAGL 600 NI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02506 | PLN02506 | 3.0e-149 | 86 | 600 | 520 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02201 | PLN02201 | 5.0e-151 | 148 | 602 | 469 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 4.0e-160 | 147 | 600 | 455 | + pectinesterase/pectinesterase inhibitor |
| PLN02484 | PLN02484 | 0 | 1 | 602 | 603 | + probable pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 288 | 586 | 299 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42038.1 | 0 | 1 | 602 | 1 | 617 | pectin methylesterase 1 [Pyrus communis] |
| RefSeq | NP_190491.1 | 0 | 1 | 602 | 1 | 598 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002278061.1 | 0 | 80 | 602 | 70 | 597 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 80 | 600 | 31 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 80 | 602 | 81 | 605 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 283 | 600 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 285 | 600 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-19 | 292 | 558 | 12 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-19 | 292 | 558 | 12 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-19 | 292 | 558 | 12 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
