Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10010277m |
Family | GH3 |
Protein Properties | Length: 537 Molecular Weight: 58038.2 Isoelectric Point: 5.3617 |
Chromosome | Chromosome/Scaffold: 16 Start: 4779739 End: 4782484 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 10 | 245 | 0 |
LASRLGIPIIYGTDAVHGNNNVYGATVFPHNIGLGATRDADLVRRIGAATALEVRASGVHWAFAPCVAVLRDPRWGRSYESYGEDAGLVCEMTSLVSGLQ GVPPEEHPNGYPFVAGRNNVVACAKHFVGDGGTDKGINEGNTITSYEDLEKIHIPPYLNCLAQGVSTVMASYSSWNGSRLHADYFLLTEVLKEKLGFKGF VISDWEGLDRLSEPQGSNYRNCIKLAVNAGVDMVMV |
Full Sequence |
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Protein Sequence Length: 537 Download |
MIDGFQRSAL ASRLGIPIIY GTDAVHGNNN VYGATVFPHN IGLGATRDAD LVRRIGAATA 60 LEVRASGVHW AFAPCVAVLR DPRWGRSYES YGEDAGLVCE MTSLVSGLQG VPPEEHPNGY 120 PFVAGRNNVV ACAKHFVGDG GTDKGINEGN TITSYEDLEK IHIPPYLNCL AQGVSTVMAS 180 YSSWNGSRLH ADYFLLTEVL KEKLGFKGFV ISDWEGLDRL SEPQGSNYRN CIKLAVNAGV 240 DMVMVPFKYE KFIQDMTSLV ESGEILMARV NDAVERILRV KFVAGLFEHP LTDRSLLGTV 300 GCEKHREVAR EAVRKSLVLL KKGENADKPF LPLDRNAKRI LVTGPHADDL GYQCGGWTKT 360 WFGLSGKITI GTTLLDAIKA AVGDKTEVIY EKTPSKETLA SSEGFSYAIV AVGESPYAET 420 IGDSSELIIP FNGSDIVTTV AERIPTLVIL ISGRPVVLEP AVLEKTEALV AAWLPGTEGQ 480 GMADVIFGDY DFEGKLPVSW FKTVEHLPLN AHANSYDPLF PLGFGLNSKT GVTSPV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-45 | 8 | 516 | 560 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-49 | 317 | 527 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-79 | 9 | 280 | 276 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-80 | 12 | 536 | 593 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-84 | 11 | 358 | 355 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25449.1 | 0 | 1 | 531 | 51 | 581 | At3g47010 [Arabidopsis thaliana] |
RefSeq | NP_190284.1 | 0 | 1 | 529 | 78 | 606 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190285.3 | 0 | 1 | 531 | 79 | 609 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_190288.1 | 0 | 1 | 527 | 78 | 629 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190289.1 | 0 | 1 | 530 | 78 | 605 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 528 | 73 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 1 | 528 | 73 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 1 | 528 | 73 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 1 | 528 | 73 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 1 | 528 | 73 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 328 | 59 | 386 | 0 |
EX132989 | 277 | 1 | 277 | 0 |
EX134175 | 296 | 236 | 531 | 0 |
ES901611 | 273 | 208 | 480 | 0 |
HO784016 | 404 | 1 | 403 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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