Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10010363m |
Family | CBM43 |
Protein Properties | Length: 457 Molecular Weight: 49119 Isoelectric Point: 9.74 |
Chromosome | Chromosome/Scaffold: 16 Start: 259694 End: 262279 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 455 | 8.1e-34 |
WCVAKSGATDAQLQGNIDWVCSQGGVDCKPIQAGGSCFNPSNLRTHASFVMNAYFQKNGRNDGSCNFSGTGVVVGNNPSNGACK | |||
GH17 | 30 | 342 | 0 |
IGVNYGTLGNLPPPTQVANFIKTQTSIDSVKIFDVNPDILRAFAGTGISVVVTVPNGDIPALANGRQARRWVSANILPYHPQTKIKYISVGNEILLTGDN NMISNLLPAMRNLNNALVRAGVKDVKVTTAHSLNIIAYDLTGAPSSGRFRPGWDKNILAPILAYHRRTKSPFMVNPYPYFGFDPKNVNFAIFRSPYKAVR DPFTRKVYTNMYDALMDSTYSAMKALGYGDVNIVVGETGWPSACDAPWCSLENAAWFNLNIIKRSQGQGTPLMPNRRFETYIFGLFNEEGKPGPTAERNW GLFRSDFSPVYDV |
Full Sequence |
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Protein Sequence Length: 457 Download |
MAKEPPSISL LLLLLSAVVF ITFPAAISAI GVNYGTLGNL PPPTQVANFI KTQTSIDSVK 60 IFDVNPDILR AFAGTGISVV VTVPNGDIPA LANGRQARRW VSANILPYHP QTKIKYISVG 120 NEILLTGDNN MISNLLPAMR NLNNALVRAG VKDVKVTTAH SLNIIAYDLT GAPSSGRFRP 180 GWDKNILAPI LAYHRRTKSP FMVNPYPYFG FDPKNVNFAI FRSPYKAVRD PFTRKVYTNM 240 YDALMDSTYS AMKALGYGDV NIVVGETGWP SACDAPWCSL ENAAWFNLNI IKRSQGQGTP 300 LMPNRRFETY IFGLFNEEGK PGPTAERNWG LFRSDFSPVY DVGLLRNGQG GGGRGGGGRP 360 ALPAPSTGGG KWCVAKSGAT DAQLQGNIDW VCSQGGVDCK PIQAGGSCFN PSNLRTHASF 420 VMNAYFQKNG RNDGSCNFSG TGVVVGNNPS NGACKY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 67 | 335 | 275 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-26 | 371 | 443 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-41 | 371 | 456 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-84 | 30 | 342 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76666.1 | 0 | 33 | 456 | 32 | 449 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAM66982.1 | 0 | 33 | 456 | 32 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191103.1 | 0 | 33 | 456 | 32 | 449 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | XP_002312098.1 | 0 | 29 | 456 | 29 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530863.1 | 0 | 11 | 456 | 10 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 332 | 2 | 303 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_C | 0 | 30 | 332 | 2 | 303 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_B | 0 | 30 | 332 | 2 | 303 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_A | 0 | 30 | 332 | 2 | 303 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3em5_D | 0 | 30 | 332 | 2 | 303 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |