Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10011342m |
Family | CE8 |
Protein Properties | Length: 586 Molecular Weight: 64066 Isoelectric Point: 9.0585 |
Chromosome | Chromosome/Scaffold: 7 Start: 814921 End: 817451 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 570 | 0 |
DVTVAADGSGDVKTVNEAVLKVPKKSKKVFVIYVKAGRYVENVVMDKSKWNVMIFGDGKEKTIISGNKNFIDGTPTYATATFAIQGKGFIMKDIGIINTA GAEKHQAVAFRSGSDFSVYHRCSFDGYQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLPRQFNTITAQGKKDPNQNSGMSIQRCTIS GNGNVTAPTYLGRPWKEFSTTVIMETEIGPVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVAQRVKWAGYKPVMSAEEAAKFTVTTLLH |
Full Sequence |
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Protein Sequence Length: 586 Download |
MDSVNSFKGY GKVDEAQDLA LKKKTRKRLI ILSVSVVILV AVIIAAVVAT VVHNKKKNSS 60 ESTPSSPSEL SPSTSLKSIC SVTRFPESCF YSISKLPSSN TTDPEILFKL SLKVIIDELD 120 SISDLPEKLS NGTKDERIKS ALRVCGNLIE DALDRLNDTV SAMDAFDDGE KKTLTSSKID 180 DLKTWLSATV TDHETCFDSI DELAQNKTEY ANSTITQNLK SAMSRSTEFT SNSLAIVSKI 240 LAALSNLGIP IHGRRRLLSN QQPEWARRRL LQTENLKPDV TVAADGSGDV KTVNEAVLKV 300 PKKSKKVFVI YVKAGRYVEN VVMDKSKWNV MIFGDGKEKT IISGNKNFID GTPTYATATF 360 AIQGKGFIMK DIGIINTAGA EKHQAVAFRS GSDFSVYHRC SFDGYQDTLY PHSNRQFYRD 420 CDVTGTIDFI FGSAAVVFQG CKIMPRQPLP RQFNTITAQG KKDPNQNSGM SIQRCTISGN 480 GNVTAPTYLG RPWKEFSTTV IMETEIGPVV RPSGWMSWVS GVDPPASIVY GEYKNTGPGS 540 DVAQRVKWAG YKPVMSAEEA AKFTVTTLLH GGDWIPATGV THQLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-149 | 80 | 581 | 518 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-154 | 79 | 583 | 517 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 585 | 594 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 79 | 583 | 519 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 279 | 571 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 585 | 1 | 586 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_175787.1 | 0 | 1 | 585 | 1 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002265217.1 | 0 | 1 | 585 | 1 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 583 | 1 | 585 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 581 | 1 | 584 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 279 | 582 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 272 | 578 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 3e-16 | 291 | 576 | 19 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 3e-16 | 291 | 576 | 19 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 3e-16 | 291 | 576 | 19 | 339 | A Chain A, Pectin Methylesterase From Carrot |