Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10011343m |
Family | CE8 |
Protein Properties | Length: 585 Molecular Weight: 64030.8 Isoelectric Point: 9.859 |
Chromosome | Chromosome/Scaffold: 7 Start: 818839 End: 822172 |
Description | pectin methylesterase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 273 | 568 | 0 |
DVTVAADGSGDFRTIAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKKNVMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTA GPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCHIIGTVDFIFGNAAAVFQDCDINARRPNSNQKNMVTAQGRSDPNQNTGIVIQNCRIG ATSDLLAVKGSFPTYLGRPWKQYSRTVIMQSDISDVIRPAGWLEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGFKVITSVTEAEQYTAGQFIG |
Full Sequence |
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Protein Sequence Length: 585 Download |
MAPSKDFISK FSDFKNNKKL VFSSAVLALL LFATVVGIAT TKANHNNSQK TKTLSLTSHA 60 VLKSVCTSTR YPELCFSAVA STGKKLTSHK DVIEASLNLT TNVVKHNYFA VKKLITKRKG 120 GLRAREATAL HDCLETIDET LDELHVAVED LHQYPKGKSL RKHADDLKTL ISSAITNQET 180 CLDGFSYDDA DRKVRKALMK GQVHVEHMCS NALAMIKNMT DTDIANFELK DRSTSSNNRK 240 LKEVTGDLDG EGWPNWLSVG DRRLLQGSTV KADVTVAADG SGDFRTIAAA VAAAPEKSNK 300 RFVIHIKAGV YRENVEVTKK KKNVMFLGDG RGKTIITGSR NVVDGSTTFH SATVAAVGER 360 FLARDITFQN TAGPSKHQAV ALRVGSDFSA FYNCDMLAYQ DTLYVHSNRQ FFVKCHIIGT 420 VDFIFGNAAA VFQDCDINAR RPNSNQKNMV TAQGRSDPNQ NTGIVIQNCR IGATSDLLAV 480 KGSFPTYLGR PWKQYSRTVI MQSDISDVIR PAGWLEWSGS FALDTLTYRE YLNRGGGAGT 540 ANRVKWKGFK VITSVTEAEQ YTAGQFIGGG SWLASTGFPF LLSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 3.0e-171 | 35 | 584 | 561 | + pectinesterase | ||
PLN02313 | PLN02313 | 0 | 1 | 584 | 588 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 273 | 569 | 297 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 52 | 580 | 531 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 58 | 584 | 532 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50023.1 | 0 | 6 | 584 | 1 | 582 | ATPME2 precursor [Arabidopsis thaliana] |
GenBank | AAC72288.1 | 0 | 52 | 584 | 49 | 592 | putative pectin methylesterase [Arabidopsis thaliana] |
EMBL | CAB95025.1 | 0 | 44 | 584 | 44 | 579 | pectin methylesterase [Nicotiana tabacum] |
RefSeq | NP_175786.1 | 0 | 1 | 584 | 1 | 587 | ATPME2; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188048.1 | 0 | 52 | 584 | 49 | 592 | ATPME3; pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 266 | 584 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 270 | 584 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-25 | 268 | 568 | 2 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 268 | 568 | 2 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-25 | 268 | 568 | 2 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |