Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10011369m |
Family | AA1 |
Protein Properties | Length: 550 Molecular Weight: 61662.3 Isoelectric Point: 9.4097 |
Chromosome | Chromosome/Scaffold: 7 Start: 337479 End: 339698 |
Description | SKU5 similar 14 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 32 | 502 | 0 |
VTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNIVINVFNNLDEPFLLTWSGIQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLH RFAGGFGGLRVNSRLLIPVPYADPEDDYTVLLGDWYTSGHTALKNFLDSGRTLGLPNGVLINGKSGKVGGNNEPLFTMKPGKTYKYRLCNVGFKSTLNFR IQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTADQAAKDYYMVASTRFLKKELSTVGVIRYAGSNVQASAELPKAPVGWAWSLNQFRSFRWNLTA SAARPNPQGSYHYGKINITRSIKLVSSKNMVNGKVRFGFNSVSHVDTETPLKLAEYFQMAEKVFKYNVIKDEPAAKITALTVEPNVLNITFRTFVEIIFE NHEKSMQSFHLDGYSFFAVASEPGRWTPEKRKNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIRSEN |
Full Sequence |
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Protein Sequence Length: 550 Download |
MEGRLLTVLV CLVSTVAIVN AGDPYFFYTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS 60 TSNNNIVINV FNNLDEPFLL TWSGIQHRKN CWQDGVAGTS CPIPAGQNFT YHFQPKDQIG 120 SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTSG HTALKNFLDS 180 GRTLGLPNGV LINGKSGKVG GNNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV 240 EMEGSHVLQN DYDSLDVHVG QCFSVLVTAD QAAKDYYMVA STRFLKKELS TVGVIRYAGS 300 NVQASAELPK APVGWAWSLN QFRSFRWNLT ASAARPNPQG SYHYGKINIT RSIKLVSSKN 360 MVNGKVRFGF NSVSHVDTET PLKLAEYFQM AEKVFKYNVI KDEPAAKITA LTVEPNVLNI 420 TFRTFVEIIF ENHEKSMQSF HLDGYSFFAV ASEPGRWTPE KRKNYNLLDA VSRHTVQVYP 480 KSWSAILLTF DNAGMWNIRS ENWERRYLGQ QLYASVLSPE KSLRDEYNIP LNTNLCGIVK 540 GLPMPAIYT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 17 | 549 | 533 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 18 | 537 | 521 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 17 | 541 | 525 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 19 | 547 | 532 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 24 | 540 | 529 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10639.1 | 0 | 1 | 549 | 1 | 558 | putative pollen specific protein [Arabidopsis thaliana] |
RefSeq | NP_175953.1 | 0 | 4 | 543 | 6 | 547 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_187948.1 | 0 | 3 | 549 | 4 | 550 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_564697.1 | 0 | 1 | 549 | 1 | 549 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002299087.1 | 0 | 1 | 549 | 1 | 550 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 496 | 6 | 503 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asq_A | 0 | 28 | 496 | 6 | 503 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asp_B | 0 | 28 | 496 | 6 | 503 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asp_A | 0 | 28 | 496 | 6 | 503 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1aso_B | 0 | 28 | 496 | 6 | 503 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |