| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10012588m |
| Family | GH116 |
| Protein Properties | Length: 958 Molecular Weight: 106895 Isoelectric Point: 6.1964 |
| Chromosome | Chromosome/Scaffold: 2 Start: 18503738 End: 18508781 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 526 | 888 | 0 |
| GHFLYLEGIEYRMWNTYDVHFYASFALVMLFPKLELSIQRDFAAAVMLHDPTKVKTLSEGQWVQRKVLGAVPHDLGINDPWFEVNGYNLHNTDRWKDLNP KFVLQVYRDVVATGDKKFALAVWPSVYVAMAYMAQFDKDGDGMIENEGFPDQTYDTWSASGVSAYCGGLWVAALQAASALAREVGDKNSQDYFWSKFQKA KDVYEKKLWNGSYFNYDNSGSQYSSSIQADQLAGQWYARASGLLPIVDEDKARTALEKVYNFNVMKIKDGKRGAVNGMHPNGKVDTASMQSREIWSGVTY AISATMIQEGLTDMAFQTASGVYEAAWSETGLGYSFQTPEAWNTNDQYRSLTYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 958 Download |
| MSDEKIINNG EDVKSFQSSA TKVDPAVPAS LTWQRKIDSD VKAPREFALT AKEIFQLAPV 60 GIRLWFLCRE EAAKGRLAFI DPFSKHSVTS SHGVPLGGVG AGSIGRSFKG EFQRWQLFPP 120 KCEDEPVLAN QFSAFVSRNG KKYSSVLCPR NPKLGKQESE CGIGSWDWNL TGDKSTYHAL 180 YPRSWTMYEG EPDPELRIVC RQVSPFIPHN YKDSSFPVSV FTFTLHNFGN TTADATLLFT 240 WTNSVGGDSE FSGGHYNSKI MMNDGVQGVL LHHKTAKGLP SLSYAISAQA TDGVSVSICP 300 FFIVSGKQNG ITAKDMWETI KEQGSFDHLN ASETSMQSER GSSIGAAVAA SATVPPGETR 360 TVTFSLAWDC PEVQFPSGKI YSRRYTKFYG THGDAAAQIA YDAILGYSQW ESLIEAWQRP 420 VLEDKRLPAW YPITLFNELY YLNSGGTLWT DGSPPLHSLA VVREKKFTLE KSQHSMKNII 480 DVPHQNDTAI SVLEKMASTL EQLHASTTSN SAFGTKLLEE GEENIGHFLY LEGIEYRMWN 540 TYDVHFYASF ALVMLFPKLE LSIQRDFAAA VMLHDPTKVK TLSEGQWVQR KVLGAVPHDL 600 GINDPWFEVN GYNLHNTDRW KDLNPKFVLQ VYRDVVATGD KKFALAVWPS VYVAMAYMAQ 660 FDKDGDGMIE NEGFPDQTYD TWSASGVSAY CGGLWVAALQ AASALAREVG DKNSQDYFWS 720 KFQKAKDVYE KKLWNGSYFN YDNSGSQYSS SIQADQLAGQ WYARASGLLP IVDEDKARTA 780 LEKVYNFNVM KIKDGKRGAV NGMHPNGKVD TASMQSREIW SGVTYAISAT MIQEGLTDMA 840 FQTASGVYEA AWSETGLGYS FQTPEAWNTN DQYRSLTYMR PLAIWAMQWA LTKTSVQQQH 900 DLEPEPEPVS EPSSLMKHDI GFSRVSRLLN LPNEASPKGT LQTLFDYTCR RMMSYTH* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12215 | GBA2_N | 3.0e-63 | 93 | 410 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-71 | 525 | 895 | 388 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-169 | 526 | 889 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA97011.1 | 0 | 1 | 954 | 1 | 928 | unnamed protein product [Arabidopsis thaliana] |
| DDBJ | BAE99037.1 | 0 | 1 | 954 | 1 | 957 | hypothetical protein [Arabidopsis thaliana] |
| DDBJ | BAH19567.1 | 0 | 1 | 954 | 1 | 957 | AT5G49900 [Arabidopsis thaliana] |
| RefSeq | NP_199801.2 | 0 | 1 | 954 | 1 | 957 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002528846.1 | 0 | 1 | 952 | 1 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 359 | 539 | 894 | 0 |
| JG703027 | 329 | 544 | 872 | 0 |
| DK488620 | 280 | 324 | 602 | 0 |
| DK470483 | 278 | 324 | 600 | 0 |
| DK477296 | 271 | 324 | 593 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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