Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10012900m |
Family | GH3 |
Protein Properties | Length: 667 Molecular Weight: 72272 Isoelectric Point: 7.0062 |
Chromosome | Chromosome/Scaffold: 2 Start: 1365238 End: 1369342 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 341 | 0 |
LVSRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRDPDLVKRIGAATAVEVRATGIPYTFAPCIAVCRDPRWGRCYESYSEDHKVVEDMTDVILGLQ GEPPSNFKHGVPFVGGKDKVAACAKHYVGDGGTTRGINENNTVTDLHGLLSVHMPAYADAIYKGVSTVMVSYSSWNGEKMHANTELITGYLKGTLKFKGF VISDWQGVDKISTPPHSNYTASVRAAIQAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 667 Download |
MSKVPVRIVG ILLWMCVWVC NGDGEYVLYK DPKQKVSDRV VDLLGRMTLE EKIGQMVQID 60 RSVATVNIMR DYFIGSVLSG GGSAPLPEAT AQNWVDMINE YQKGALVSRL GIPMIYGIDA 120 VHGHNNVYNA TIFPHNVGLG ATRDPDLVKR IGAATAVEVR ATGIPYTFAP CIAVCRDPRW 180 GRCYESYSED HKVVEDMTDV ILGLQGEPPS NFKHGVPFVG GKDKVAACAK HYVGDGGTTR 240 GINENNTVTD LHGLLSVHMP AYADAIYKGV STVMVSYSSW NGEKMHANTE LITGYLKGTL 300 KFKGFVISDW QGVDKISTPP HSNYTASVRA AIQAGIDMVM VPFNFTEFVN DLMSLVKSKV 360 IPITRIDDAV RRILLVKFTM GLFENPLADY TFSNELGSQA HRDLAREAVR KSLVLLKNGN 420 KTNPMLPLPR KTSKILVAGT HADNLGYQCG GWTITWQGSS GNKNTRGTTI LGAIKSAVDQ 480 STEVVFRENP DAEFIKANNF AYAIIAVGEP PYAETAGDSD KLTMMDPGPA IISSTCQAVK 540 CVVVVISGRP LVMEPYLASI EALVAAWLPG TEGQGITDAL FGDHGFSGKL PVTWFRNTEQ 600 LPMSYGDSHY DPLFAYGSGL ETESVASIVA RSTSASAAVT KPCIITVLVS ATFCLFLFPS 660 LSRVLR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-36 | 105 | 616 | 566 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-47 | 413 | 620 | 226 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-80 | 40 | 620 | 649 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 5.0e-85 | 48 | 374 | 331 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-87 | 47 | 455 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42711.1 | 0 | 97 | 664 | 1 | 568 | unknown protein [Arabidopsis thaliana] |
EMBL | CBI24995.1 | 0 | 47 | 657 | 1 | 614 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 1 | 664 | 1 | 665 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 25 | 657 | 24 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 12 | 649 | 9 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 25 | 624 | 1 | 601 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1iex_A | 0 | 25 | 624 | 1 | 601 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1iew_A | 0 | 25 | 624 | 1 | 601 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1iev_A | 0 | 25 | 624 | 1 | 601 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1ieq_A | 0 | 25 | 624 | 1 | 601 | A Chain A, The Structure Of Soybean Peroxidase |