Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013035m |
Family | AA1 |
Protein Properties | Length: 597 Molecular Weight: 66985.8 Isoelectric Point: 8.0682 |
Chromosome | Chromosome/Scaffold: 2 Start: 13795963 End: 13798941 |
Description | SKU5 similar 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 51 | 520 | 0 |
QQVIAVNGNFPGPLINATTNYNVKVNVFNHLDEPLLLTWPGVEMRRNSWQDGVLGTNCPIPPRWNFTYNFQLKDQIGSFYYFPSLNFQRASGGFGPFIVN NRELIPIPFPKPDGEISFMIGDWYTQNHTALRSILDSGKELGMPDGVLINGKGPYKYNSSVPDGIEYETVNVEPGKTYRIRVHNVGISTSLNFRIQNHKL LLVETEGRYTSQTNFTDFDIHVGQSYSFLVTMDQNASSDYYIVASARFVNETVWQRVTGVGILHYSNSKGRASGPLPVPSTDVSHPWSVMNQQRAIKQNT SASGARPNPQGSYHYGQINITKTYIFRSMPPTKINGSLRATLNGISFLNPSTPIRLADNYEVKGAYKLDFPDRPHDNRPPRLDRSIINATYKDFIQVIFQ NNDTKVHSFHIDGYSFYVVAMDFGNWTEDRKGSYNNWDAISRSTIEVYPGAWTAVLMSLDNVGVWNIRVE |
Full Sequence |
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Protein Sequence Length: 597 Download |
MAAADFPSRF SVLAFVFTFA LLSGFSLASD PFVSYVFKVS YVTASPLGVP QQVIAVNGNF 60 PGPLINATTN YNVKVNVFNH LDEPLLLTWP GVEMRRNSWQ DGVLGTNCPI PPRWNFTYNF 120 QLKDQIGSFY YFPSLNFQRA SGGFGPFIVN NRELIPIPFP KPDGEISFMI GDWYTQNHTA 180 LRSILDSGKE LGMPDGVLIN GKGPYKYNSS VPDGIEYETV NVEPGKTYRI RVHNVGISTS 240 LNFRIQNHKL LLVETEGRYT SQTNFTDFDI HVGQSYSFLV TMDQNASSDY YIVASARFVN 300 ETVWQRVTGV GILHYSNSKG RASGPLPVPS TDVSHPWSVM NQQRAIKQNT SASGARPNPQ 360 GSYHYGQINI TKTYIFRSMP PTKINGSLRA TLNGISFLNP STPIRLADNY EVKGAYKLDF 420 PDRPHDNRPP RLDRSIINAT YKDFIQVIFQ NNDTKVHSFH IDGYSFYVVA MDFGNWTEDR 480 KGSYNNWDAI SRSTIEVYPG AWTAVLMSLD NVGVWNIRVE NLDRWYLGQE TYMRIVNPEE 540 NGKTEMDKPK NALYCGALQG LQIAQHHSSA SKILNGQLDL IFSLMMVLLA IVSAFC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00044 | PLN00044 | 0 | 7 | 590 | 593 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 28 | 569 | 545 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 10 | 556 | 558 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 19 | 560 | 544 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 14 | 570 | 558 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 11 | 562 | 6 | 557 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 11 | 577 | 6 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_199961.1 | 0 | 21 | 596 | 16 | 592 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 15 | 591 | 13 | 589 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 19 | 595 | 14 | 591 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asq_A | 0 | 35 | 557 | 6 | 540 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asp_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asp_A | 0 | 35 | 557 | 6 | 540 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1aso_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |