Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013056m |
Family | CE8 |
Protein Properties | Length: 590 Molecular Weight: 64645.4 Isoelectric Point: 8.24 |
Chromosome | Chromosome/Scaffold: 2 Start: 11864732 End: 11866756 |
Description | pectin methylesterase PCR fragment F |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 275 | 571 | 0 |
DITVSKDGTGTFKTIAEAIKKAPEHSSRRFVIYVKSGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSITDDLTTFHTATFAATGAGFIVRDMTFENY AGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECDIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKL LATADLEASRGSFPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDTLYYGEYMNRGAGSGTGQRVKWPGYRVITSTVEASKFTVAQFIA |
Full Sequence |
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Protein Sequence Length: 590 Download |
MDYNRLGPSG SVTHPNQKDP ATSLPEIQKK TKTKLILFTL ALLIVAVVCF GIFAGIRAGG 60 SDKHEPKLTR KPTREISRTC SKAQYPNLCI DTLLDFPGSL TADEQELIHI SFNATLQSFS 120 KALYSSSTIS YTHMPPRVRS AYDSCLELLD DSVDALSRAL SSVSSSNDES RSDVMTWLSS 180 AMTNHDTCTD GFEEIEDGGG GGVKDQIIGA VKDLSEMVSN CLAIFSGNVK DLTGVPVVNN 240 RRLLGEKETT EEFPIWLKRR DRELLGTPAT AIQADITVSK DGTGTFKTIA EAIKKAPEHS 300 SRRFVIYVKS GRYEEENLKV GRKKTNLMFI GDGKGKTVIT GGKSITDDLT TFHTATFAAT 360 GAGFIVRDMT FENYAGPAKH QAVALRVGGD HAVVYRCNII GYQDALYVHS NRQFFRECDI 420 YGTVDFIFGN AAVILQSCNI YARKPMAQQK ITITAQNRKD PNQNTGISIH ACKLLATADL 480 EASRGSFPTY LGRPWKLYSR VVYMMSDMGD HIDPRGWLEW NGPFALDTLY YGEYMNRGAG 540 SGTGQRVKWP GYRVITSTVE ASKFTVAQFI AGSAWLPSTG VAFFSGLSQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 2.0e-147 | 173 | 587 | 418 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 1.0e-149 | 54 | 587 | 557 | + Pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-167 | 67 | 587 | 525 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 1 | 589 | 592 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 275 | 573 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 68 | 588 | 81 | 616 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_200149.1 | 0 | 1 | 589 | 1 | 587 | PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 57 | 588 | 57 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 55 | 587 | 14 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 1 | 588 | 1 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 269 | 587 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 272 | 587 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-20 | 269 | 578 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 269 | 578 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-20 | 269 | 541 | 1 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |