Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10013065m |
Family | AA3 |
Protein Properties | Length: 587 Molecular Weight: 64467.5 Isoelectric Point: 7.4484 |
Chromosome | Chromosome/Scaffold: 2 Start: 12881473 End: 12884059 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA3 | 37 | 582 | 0 |
ATFAPMFARFDYIIIGGGTSGCSLAATLSQNATVLLLERGGSPYDNPAATDIGNFATTLSNTSPKSWSQLFVSEDGVYNTRARVLGGGSVLNAGFYTRAG EEYVKEAEWNSDEVEAAYEWVEKKVAFQPPVMGWQTALKDGLLEAGEFPYNGFTYDHIYGTKIGGTIFDRAGHRHTAANLLEYANPDTISVYLHASVHKI LFTTKGRPRPKAYGVIFQDANGVLHKAELAKNAMNEVILSAGAIGSPQLLMLSGVGPMAHLATHGISPVVLDHPMVGQGMGDNPMNAIFIPSPTPVEVSL IQVVGITKFESYIEGASGVIFSYSWTRNFFDGVLNYLNEMQTSRTTTSTTPTLSTQSITDFFKSIDPLLNATTKAGLILQKVAGPVSRGHLELRNTNPND NPSVRFNYYQEPEDLEKCVEGISTIIKVINSKAFSKFKYPDATIHGLLDLILSVPTNLRPRHVASVFNLKQFCIDTVMTIWHYHGGCQVGRVVDKNYRVL GINSLRVIDGSTFLKSPGTNPQATVMMLGRYMGQKILRERATFRKK |
Full Sequence |
---|
Protein Sequence Length: 587 Download |
MSFQIFWLFR LTLIVTFISH GSCFPDQAGY YSFMKDATFA PMFARFDYII IGGGTSGCSL 60 AATLSQNATV LLLERGGSPY DNPAATDIGN FATTLSNTSP KSWSQLFVSE DGVYNTRARV 120 LGGGSVLNAG FYTRAGEEYV KEAEWNSDEV EAAYEWVEKK VAFQPPVMGW QTALKDGLLE 180 AGEFPYNGFT YDHIYGTKIG GTIFDRAGHR HTAANLLEYA NPDTISVYLH ASVHKILFTT 240 KGRPRPKAYG VIFQDANGVL HKAELAKNAM NEVILSAGAI GSPQLLMLSG VGPMAHLATH 300 GISPVVLDHP MVGQGMGDNP MNAIFIPSPT PVEVSLIQVV GITKFESYIE GASGVIFSYS 360 WTRNFFDGVL NYLNEMQTSR TTTSTTPTLS TQSITDFFKS IDPLLNATTK AGLILQKVAG 420 PVSRGHLELR NTNPNDNPSV RFNYYQEPED LEKCVEGIST IIKVINSKAF SKFKYPDATI 480 HGLLDLILSV PTNLRPRHVA SVFNLKQFCI DTVMTIWHYH GGCQVGRVVD KNYRVLGINS 540 LRVIDGSTFL KSPGTNPQAT VMMLGRYMGQ KILRERATFR KKDEEA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 3.0e-13 | 421 | 573 | 158 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 1.0e-24 | 421 | 565 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
PRK02106 | PRK02106 | 7.0e-32 | 45 | 318 | 327 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 5.0e-44 | 40 | 577 | 595 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 3 | 576 | 582 | + Protein HOTHEAD |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB11043.1 | 0 | 1 | 566 | 1 | 563 | mandelonitrile lyase-like protein [Arabidopsis thaliana] |
EMBL | CAB87405.1 | 0 | 1 | 566 | 1 | 557 | ADHESION OF CALYX EDGES-like protein [Arabidopsis thaliana] |
RefSeq | NP_001119417.1 | 0 | 34 | 586 | 1 | 553 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | NP_200008.1 | 0 | 1 | 586 | 1 | 586 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | NP_567032.1 | 0 | 1 | 585 | 1 | 576 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ju2_B | 0 | 30 | 577 | 11 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1ju2_A | 0 | 30 | 577 | 11 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_B | 0 | 30 | 577 | 11 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_A | 0 | 30 | 577 | 11 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdn_B | 0 | 30 | 577 | 11 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |