| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10013215m |
| Family | GH14 |
| Protein Properties | Length: 534 Molecular Weight: 58423.6 Isoelectric Point: 5.5917 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6374746 End: 6377700 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 89 | 493 | 0 |
| FVGLPLDTVSDCYNVNHMKAITAGLKALKLLGVEGIELPIFWGVVEKEAAGKYEWSGYLAVAEIVKKVGLKLHASLSFHGSKDPEIGLPDWVSKIGEAEP GLYFTDRYGNQYHDCLSFAVDDAPVLDGRTPMEVYRGFCESFKSAFSDYMGNTITGITLGMGPDGELRYPSHQHDDKFSGAGEFQCYDKYMLSALKQYAE STGNPLWGLGGPHDAPTYNQQPHSSSFFSDGGSWESQYGDFFLSWYSSLLISHADRVLSVASSAFNGSGVSVCGKLPLLHQWHKLRSQPSELTAGFYSSN GQDRYEAIAEIFAKNSCRMIIPGMDLSDEHQPPESLSSPESLLAHIKTSCKKQGVVVSGQNSSVPVPGGFERIVENLEDENAGIDLFTYQRMGARFFSPE HFHAF | |||
| Full Sequence |
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| Protein Sequence Length: 534 Download |
| MEVSVIGNPQ ARICRSELVY RELGFRFGSE VISGESRNRV SFRSQISKLK EIGIRCSSRS 60 VKCEAIISDQ VPFLNSTPKS RSLESVKLFV GLPLDTVSDC YNVNHMKAIT AGLKALKLLG 120 VEGIELPIFW GVVEKEAAGK YEWSGYLAVA EIVKKVGLKL HASLSFHGSK DPEIGLPDWV 180 SKIGEAEPGL YFTDRYGNQY HDCLSFAVDD APVLDGRTPM EVYRGFCESF KSAFSDYMGN 240 TITGITLGMG PDGELRYPSH QHDDKFSGAG EFQCYDKYML SALKQYAEST GNPLWGLGGP 300 HDAPTYNQQP HSSSFFSDGG SWESQYGDFF LSWYSSLLIS HADRVLSVAS SAFNGSGVSV 360 CGKLPLLHQW HKLRSQPSEL TAGFYSSNGQ DRYEAIAEIF AKNSCRMIIP GMDLSDEHQP 420 PESLSSPESL LAHIKTSCKK QGVVVSGQNS SVPVPGGFER IVENLEDENA GIDLFTYQRM 480 GARFFSPEHF HAFAVFVRNM NQFELSSQDQ AGENVAESLS IGSGTGAASL QAA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 1.0e-84 | 86 | 403 | 326 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-84 | 86 | 500 | 432 | + beta-amylase | ||
| PLN02161 | PLN02161 | 3.0e-90 | 20 | 501 | 513 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-100 | 86 | 515 | 446 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-112 | 76 | 515 | 455 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK85300.1 | 0 | 1 | 533 | 1 | 537 | AF402598_1 putative beta-amylase BMY3 [Arabidopsis thaliana] |
| EMBL | CAI39245.1 | 0 | 1 | 533 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 525 | 1 | 532 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_197368.1 | 0 | 1 | 533 | 1 | 536 | BMY3; beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002276777.1 | 0 | 1 | 525 | 1 | 532 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 86 | 501 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1fa2_A | 0 | 86 | 501 | 13 | 444 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1v3i_A | 0 | 83 | 501 | 9 | 442 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 83 | 501 | 9 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 83 | 501 | 9 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY443880 | 294 | 53 | 345 | 0 |
| FY448068 | 268 | 80 | 346 | 0 |
| EX130723 | 289 | 190 | 478 | 0 |
| FY449384 | 280 | 20 | 295 | 0 |
| HO781436 | 405 | 134 | 534 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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