| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10013225m |
| Family | GH14 |
| Protein Properties | Length: 532 Molecular Weight: 60357.1 Isoelectric Point: 8.6663 |
| Chromosome | Chromosome/Scaffold: 2 Start: 10281177 End: 10284236 |
| Description | beta-amylase 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 95 | 520 | 0 |
| YVMMPIDTFGIDASGCPIIKRLKALTVSLKALKLAGVHGVAVEVWWGIVERFCPLEFRWSLYEELFRLISEAGLKLHVSLCFHSNMHLFRGKGGISLPLW IREIGDVNKDIYYRDKNGFSNKDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTNFEPYFGNVIEEISIGLGPSGELRYPAHPSGDGRWNFPGIGEFQCHD KYMMEDLMAVASQEGKPQWGGRDPPNAGCYNSFPSGVPFFEEGHDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEERNSVMLVAKIGGIYW WYKTSSHPAELTAGYYNTALRDGYDPVASVLSRHGAALHIPCLDMADSETPENYLCSPEGLLRQIHDVSKKRTIQVTGRNTSERFDVMGLRKIRENCVQP NGDTVRSFTFFRMNEKIFRVENWNNF | |||
| Full Sequence |
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| Protein Sequence Length: 532 Download |
| MAEIGGIGCG CRGLSGGNFF HPGGFSLKSC FLEQRTRRNR NFLRNVSMIP PFKRGRFITK 60 WRSDSGNRRI FSMDAREKSR SFVLVSSRHK KVPVYVMMPI DTFGIDASGC PIIKRLKALT 120 VSLKALKLAG VHGVAVEVWW GIVERFCPLE FRWSLYEELF RLISEAGLKL HVSLCFHSNM 180 HLFRGKGGIS LPLWIREIGD VNKDIYYRDK NGFSNKDYLT LGVDQLPLFG GRTAVQCYED 240 FMLSFSTNFE PYFGNVIEEI SIGLGPSGEL RYPAHPSGDG RWNFPGIGEF QCHDKYMMED 300 LMAVASQEGK PQWGGRDPPN AGCYNSFPSG VPFFEEGHDS FLSDYGRFFL EWYSGKLICH 360 ADAILAKAAD VLRRRQEEER NSVMLVAKIG GIYWWYKTSS HPAELTAGYY NTALRDGYDP 420 VASVLSRHGA ALHIPCLDMA DSETPENYLC SPEGLLRQIH DVSKKRTIQV TGRNTSERFD 480 VMGLRKIREN CVQPNGDTVR SFTFFRMNEK IFRVENWNNF VPFVRQMSAD V* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 3.0e-104 | 92 | 530 | 446 | + beta-amylase | ||
| PLN00197 | PLN00197 | 6.0e-135 | 90 | 527 | 443 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 1.0e-138 | 92 | 530 | 454 | + beta-amylase | ||
| PLN02803 | PLN02803 | 4.0e-149 | 86 | 528 | 443 | + beta-amylase | ||
| PLN02161 | PLN02161 | 0 | 1 | 531 | 531 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 48 | 531 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAK84008.1 | 0 | 86 | 528 | 77 | 508 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
| DDBJ | BAH20280.1 | 0 | 34 | 531 | 1 | 498 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 1 | 531 | 1 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002265698.1 | 0 | 1 | 531 | 1 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6d_A | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1v3i_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1wds_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdp_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1q6c_A | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE465458 | 241 | 244 | 484 | 0 |
| EV096717 | 235 | 115 | 349 | 0 |
| FY454531 | 262 | 19 | 276 | 0 |
| EV107336 | 225 | 308 | 532 | 0 |
| DR365735 | 223 | 87 | 309 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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