Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013422m |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 52324.5 Isoelectric Point: 5.981 |
Chromosome | Chromosome/Scaffold: 2 Start: 8986338 End: 8988051 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 1.3e-23 |
WCVMKPNVRLDDPQVAPSVSYACSLGDCTSLGVGTSCGNLDGKENISYAFNSYYQINDQLDTACKFPNISEVTKTDPSTGTC | |||
GH17 | 22 | 340 | 0 |
IGANWGTQASHPLPPDIVVRMLRDNGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLS TYNGSYLSTTFPALRNIQIALIKAGLRDQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSDNGGPFTVNIYPFISLYNDANFPVDYAFFDG NSQPVSDGGTFYYNMFDANYDTLVHALEKNGFGNMPIIVGEIGWPTDGDRNANVEYARKFNQGFMSHISGGKGTPRRPGPIDAYLFSLIDEDAKSVQPGY FERHWGIFTFDGLPKYALN |
Full Sequence |
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Protein Sequence Length: 479 Download |
MGWGFLVVLL TVSLVSQRAS SIGANWGTQA SHPLPPDIVV RMLRDNGIQK VKLFDAEYDT 60 LRALGKSGIE VMVGIPNEML ATLASSLKAA EKWVAKNVST HISTDNVNIR YVAVGNEPFL 120 STYNGSYLST TFPALRNIQI ALIKAGLRDQ VKVTCPLNAD VYDSSTTFPS GGDFRANIRD 180 LMITIVKFLS DNGGPFTVNI YPFISLYNDA NFPVDYAFFD GNSQPVSDGG TFYYNMFDAN 240 YDTLVHALEK NGFGNMPIIV GEIGWPTDGD RNANVEYARK FNQGFMSHIS GGKGTPRRPG 300 PIDAYLFSLI DEDAKSVQPG YFERHWGIFT FDGLPKYALN LGTTNTGALI QAKGVRYLQR 360 KWCVMKPNVR LDDPQVAPSV SYACSLGDCT SLGVGTSCGN LDGKENISYA FNSYYQINDQ 420 LDTACKFPNI SEVTKTDPST GTCRFPIMIE PYYGGAVHGQ VLFMPLLLAA AITVLSIF* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 254 | 332 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-14 | 361 | 427 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-28 | 361 | 445 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-79 | 22 | 340 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24251.1 | 0 | 1 | 478 | 1 | 477 | AT5g58090/k21l19_70 [Arabidopsis thaliana] |
RefSeq | NP_200617.2 | 0 | 1 | 478 | 1 | 477 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002309034.1 | 0 | 19 | 459 | 1 | 442 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331390.1 | 0 | 6 | 455 | 1 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 4 | 475 | 9 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 21 | 341 | 1 | 315 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3f55_C | 0 | 21 | 341 | 1 | 315 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3f55_B | 0 | 21 | 341 | 1 | 315 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3f55_A | 0 | 21 | 341 | 1 | 315 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3em5_D | 0 | 21 | 341 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |