y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013478m |
Family | CBM43 |
Protein Properties | Length: 462 Molecular Weight: 49528.1 Isoelectric Point: 5.5384 |
Chromosome | Chromosome/Scaffold: 2 Start: 10532078 End: 10534074 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 456 | 2.6e-33 |
WCVANGKTPKEKLQEGLDYACGEGGADCRQIQPGATCYNPESLEAHASYAFNSYYQKNARGVGTCNFGGAAYVVSQPPKYGKCE | |||
GH17 | 27 | 346 | 0 |
IGVNYGRIANNLPAPEKVVELLKSQGINRVKLYDTEKSVLTALANSGIKVVVSLPNENLAAAAADQSYTDNWVQENVKKYMPATDIEAIAVGNEVFVDPR NTTTYLVPAMTNVQSSLVKFNLDKSIKISSPIALSALASSYPPSAGSFKPDLIEPVIKPMLDLLRKTSSHLMVNAYPFFAYAANADKISLEYALFKENAG NVDSGNGLKYSNLLDAQIDAVFAAMAAVGFNDVKLVVTETGWPSAGDENEIGAGSTNAAAYNGGLVKRVLTGNGTPLKPKEPLDVYLFALFNENQKTGPT SERNYGLFYPNENKVYDVPF |
Full Sequence |
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Protein Sequence Length: 462 Download |
MALFVISLLI FSSFSAIPFT CADSGMIGVN YGRIANNLPA PEKVVELLKS QGINRVKLYD 60 TEKSVLTALA NSGIKVVVSL PNENLAAAAA DQSYTDNWVQ ENVKKYMPAT DIEAIAVGNE 120 VFVDPRNTTT YLVPAMTNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPDLIE 180 PVIKPMLDLL RKTSSHLMVN AYPFFAYAAN ADKISLEYAL FKENAGNVDS GNGLKYSNLL 240 DAQIDAVFAA MAAVGFNDVK LVVTETGWPS AGDENEIGAG STNAAAYNGG LVKRVLTGNG 300 TPLKPKEPLD VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVPFTVRS TTPVNDSKEK 360 VPVKSPSNVG QTWCVANGKT PKEKLQEGLD YACGEGGADC RQIQPGATCY NPESLEAHAS 420 YAFNSYYQKN ARGVGTCNFG GAAYVVSQPP KYGKCEFPTG H* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-24 | 372 | 444 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-38 | 372 | 457 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-85 | 27 | 346 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 0 | 1 | 461 | 1 | 460 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
GenBank | AAM66024.1 | 0 | 1 | 461 | 1 | 460 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
DDBJ | BAB08587.1 | 0 | 1 | 450 | 1 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_001154780.1 | 0 | 1 | 450 | 1 | 449 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 1 | 461 | 1 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 27 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 27 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 27 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |