| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10013569m |
| Family | GT30 |
| Protein Properties | Length: 440 Molecular Weight: 49074.4 Isoelectric Point: 9.5153 |
| Chromosome | Chromosome/Scaffold: 2 Start: 976739 End: 979294 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT30 | 39 | 217 | 0 |
| RWPERFGCPSAVRPPGSLVWFHAVSLGEGMAAIPVIRRCNDMKPDLTILMTTTTVSAFEVIKNQLPTGVLHQFAPLDTPVAIDRFLGYWKPNAIIIMENE LWPNLIMSAAQLLIPLALLNARMSAKSFNRWSSPLFLPLASLLLSKFSLIAPLSTLQGIHFQLLQAPPFVINFAGDLKY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 440 Download |
| MELGVIVYRL YRALTYSVSP LLHLHMRWRR LRGLEHISRW PERFGCPSAV RPPGSLVWFH 60 AVSLGEGMAA IPVIRRCNDM KPDLTILMTT TTVSAFEVIK NQLPTGVLHQ FAPLDTPVAI 120 DRFLGYWKPN AIIIMENELW PNLIMSAAQL LIPLALLNAR MSAKSFNRWS SPLFLPLASL 180 LLSKFSLIAP LSTLQGIHFQ LLQAPPFVIN FAGDLKYVEN KLHVSSGTSE SIRDLIVELS 240 EMKVWIASSL HRGEEEVILG VHSLLLQSHP DSVVIIVPRH PHHGQQIAQK LRKDGQKVAL 300 RSQNEKLTSR KTNIYVVDTL GELREFYRVA PIAVIGGSFF PELTGHNLSE AAAAGCAVIT 360 GCHVGHFSHM VKAMQQANPL SITQVSTKLE LKEAIDLLLS NPEILEARQR ASKEVYESLS 420 SCIISNTWNL LNLHIFRGK* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam04413 | Glycos_transf_N | 2.0e-54 | 39 | 217 | 181 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. |
| COG1519 | KdtA | 1.0e-103 | 9 | 416 | 409 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] |
| PRK05749 | PRK05749 | 3.0e-111 | 9 | 415 | 413 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB08602.1 | 0 | 1 | 439 | 1 | 432 | 3-deoxy-D-manno-octulosonic acid transferase-like protein [Arabidopsis thaliana] |
| EMBL | CAB82942.1 | 0 | 1 | 439 | 30 | 473 | 3-deoxy-D-manno-octulosonic acid transferase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_195997.2 | 0 | 1 | 439 | 1 | 439 | 3-deoxy-D-manno-octulosonic acid transferase-related [Arabidopsis thaliana] |
| RefSeq | XP_002322900.1 | 0 | 4 | 437 | 8 | 439 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 0 | 4 | 436 | 10 | 440 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 4e-26 | 42 | 431 | 28 | 371 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_C | 4e-26 | 42 | 431 | 28 | 371 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_B | 4e-26 | 42 | 431 | 28 | 371 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_A | 4e-26 | 42 | 431 | 28 | 371 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xci_D | 4e-26 | 42 | 431 | 28 | 371 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE566308 | 250 | 127 | 376 | 0 |
| DK501546 | 268 | 1 | 268 | 0 |
| DK482427 | 252 | 1 | 252 | 0 |
| DY279419 | 382 | 35 | 414 | 0 |
| DY266328 | 362 | 6 | 367 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |