Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013732m |
Family | AA1 |
Protein Properties | Length: 400 Molecular Weight: 43591.3 Isoelectric Point: 7.0449 |
Chromosome | Chromosome/Scaffold: 2 Start: 2217373 End: 2219743 |
Description | laccase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 382 | 0 |
MDVLNLAQFTGAAPNVSDAFTINGQPGDFYRCSSQETLRFLVGSGETVLLRVVNSGLNQELFFAVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLL TADQPPAHYYMAAHAYNSANAPFDNTTTTAILQYKGAPCVTRQGNLQAQRAVPAQLPGFNDTATAAAFTAQMKSPSRVEVPLEIDEDLFFTVGLGLFNCS TPNTQRCQGPNRTRFTASINNVSFVFPRRNSIMQAYYQGNSAGVFTTDFPPIPPLAFDYTGNVSRGLWQPTRGTKAYKLKYKSKVQVILQDTSIVTIENH PMHLHGYEFYVVGTGIGNFNPSKDTASFNLLDPPRRNTIGTPPGGWVAIRFVADNPGVWLMHCHIDSHIFWGLAMVFLVENG |
Full Sequence |
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Protein Sequence Length: 400 Download |
MDVLNLAQFT GAAPNVSDAF TINGQPGDFY RCSSQETLRF LVGSGETVLL RVVNSGLNQE 60 LFFAVANHKL TVVAADASYT KPFSTNVIML GPGQTTDVLL TADQPPAHYY MAAHAYNSAN 120 APFDNTTTTA ILQYKGAPCV TRQGNLQAQR AVPAQLPGFN DTATAAAFTA QMKSPSRVEV 180 PLEIDEDLFF TVGLGLFNCS TPNTQRCQGP NRTRFTASIN NVSFVFPRRN SIMQAYYQGN 240 SAGVFTTDFP PIPPLAFDYT GNVSRGLWQP TRGTKAYKLK YKSKVQVILQ DTSIVTIENH 300 PMHLHGYEFY VVGTGIGNFN PSKDTASFNL LDPPRRNTIG TPPGGWVAIR FVADNPGVWL 360 MHCHIDSHIF WGLAMVFLVE NGEGHLQSVQ SPPLDLPQC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 3.0e-38 | 31 | 377 | 357 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-39 | 45 | 377 | 343 | + oxidoreductase | ||
pfam07731 | Cu-oxidase_2 | 6.0e-45 | 248 | 383 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 3.0e-51 | 40 | 377 | 344 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 2.0e-178 | 1 | 399 | 403 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180580.1 | 0 | 1 | 399 | 174 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
RefSeq | NP_196330.3 | 0 | 1 | 399 | 172 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
RefSeq | XP_002319955.1 | 0 | 1 | 399 | 181 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326089.1 | 0 | 1 | 399 | 181 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516345.1 | 0 | 1 | 399 | 181 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1e-38 | 15 | 377 | 181 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asq_A | 1e-38 | 15 | 377 | 181 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asp_B | 1e-38 | 15 | 377 | 181 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asp_A | 1e-38 | 15 | 377 | 181 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1aso_B | 1e-38 | 15 | 377 | 181 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY297248 | 326 | 42 | 365 | 0 |
EG529118 | 201 | 200 | 400 | 0 |
EG529116 | 201 | 200 | 400 | 0 |
EX274037 | 313 | 71 | 381 | 0 |
HO797675 | 402 | 2 | 400 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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