y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013810m |
Family | CE8 |
Protein Properties | Length: 383 Molecular Weight: 42527.9 Isoelectric Point: 9.4423 |
Chromosome | Chromosome/Scaffold: 2 Start: 6803128 End: 6806022 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 87 | 376 | 0 |
HKKHNKGDFTKIQDAIDSLPLINLVRVVIKVHAGVYKEKVNIPPMKAFITIEGEGAEKTIVEWGDTAQTPDQRGNPMGTFNSASFAVNSPFFVAKNITFK NTTPVPLPGAVGKQAVALRVSGDNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFV KCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYAGRVAWARELTDEEAKPFISLTFIDG |
Full Sequence |
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Protein Sequence Length: 383 Download |
MPKFNSFQAP ILFLLLLVIL LCSTLTQCHT KGLRIRPRNQ KNVNTTSQAQ NPEEEFMKWV 60 RFVGSLKHSV YKAAKNKLFP SYTLTVHKKH NKGDFTKIQD AIDSLPLINL VRVVIKVHAG 120 VYKEKVNIPP MKAFITIEGE GAEKTIVEWG DTAQTPDQRG NPMGTFNSAS FAVNSPFFVA 180 KNITFKNTTP VPLPGAVGKQ AVALRVSGDN AAFFGCRMLG AQDTLYDHLG RHYYKDCYIE 240 GSVDFIFGNA LSLYEGCHVH AIADKLGAVT AQGRSSVLED TGFSFVKCKV TGTGVLYLGR 300 AWGPFSRVVF AYTYMDNIIL PRGWYNWGDP SREMTVFYGQ YKCTGAGANY AGRVAWAREL 360 TDEEAKPFIS LTFIDGSEWI KL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 4.0e-116 | 44 | 380 | 338 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 6.0e-120 | 94 | 381 | 296 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-120 | 92 | 381 | 290 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-122 | 93 | 380 | 290 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 0 | 45 | 382 | 338 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 14 | 382 | 10 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 70 | 382 | 1 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 1 | 382 | 1 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 11 | 382 | 9 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 12 | 382 | 10 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 93 | 381 | 17 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8.96831e-44 | 86 | 381 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-22 | 82 | 375 | 31 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 3e-19 | 81 | 368 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 3e-19 | 81 | 368 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |